DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10669 and tra-4

DIOPT Version :10

Sequence 1:NP_651388.1 Gene:CG10669 / 43069 FlyBaseID:FBgn0039329 Length:933 Species:Drosophila melanogaster
Sequence 2:NP_001370327.1 Gene:tra-4 / 180575 WormBaseID:WBGene00018740 Length:543 Species:Caenorhabditis elegans


Alignment Length:563 Identity:102/563 - (18%)
Similarity:169/563 - (30%) Gaps:190/563 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 TNQARYEMTLDSSDT-------------------------DSDGDGDDNVVIRRSYSCELCDSPE 494
            ||||.::.|.|..:.                         |.:.|.||:..|::....||.....
 Worm    53 TNQANWQGTYDDDEMDLNNKTDLIPLLETEKTTINEDELYDDEEDDDDDEEIKKGIGFELLAQAL 117

  Fly   495 ARWPRKYLLHQHHQKEHTWLDAPHVCQRCDSRFLNLQLLKHHTSQLCQNTLKRFMCDKC------ 553
            ....:..:..:..:||...|....            :.:|....::.....:|.:.|:.      
 Worm   118 GMSAKVPVEKEEPEKERAKLSGVG------------EFMKQIRGEIKPIQKERIVLDELGFRVRD 170

  Fly   554 PQRFFWRRNLRAHLVEHKCKQESYPCDQCSRSFQDKSAVTKHKLMMHRDSNMELLPCRWCTRTFY 618
            |.:|                   .||    |..:.:..:|   |..|:| .::|.|         
 Worm   171 PSKF-------------------PPC----RIAEVQQTLT---LADHQD-GIDLPP--------- 199

  Fly   619 RPALLYKHLQRHGFTGQDLPLAETLLADASKPAGPKSVQCKICDIQFVSVADLRRHISMQGHSDQ 683
                               |.|.|.:....|....|.|:||.|..:|:......||: ...|.|.
 Worm   200 -------------------PNAPTDVRIVRKLIRQKMVRCKKCKNRFIEKNIYERHL-RDKHPDL 244

  Fly   684 PSAYMISTATGFEL-------------------------LLDDTDDSD------EETSG------ 711
            ...|:.......||                         :...::|.:      |...|      
 Worm   245 YEEYIREQEEEVELQRLEEIEANRIEELQTGGFIPPENEISQPSEDPNYIPLPGENNGGLVPRFD 309

  Fly   712 ---------RTY------SCDLCDLNFRRRREISEHQYSLHSFDKLPHNCEHCIFKTVDKNM-LH 760
                     |.|      .|..||..||....:.:|....|........|..| ||.|:.:. :.
 Worm   310 YYGRIKQLKRPYKKKVSPQCPFCDKRFRNEFSLKKHFAKKHEEMVEFQQCLKC-FKCVENDAEMA 373

  Fly   761 QHLRTQCMNTEKKFACMRCGYKFMWEENLAQHLSTQHSKQPAVPEQQPPLRRKRRFR------YQ 819
            .|      :.|..:.|..|        ...::|.|.:..          |..:::|.      ::
 Worm   374 NH------DCELTYVCFEC--------TPIRNLCTDNRL----------LNHRKKFHRGANSGFR 414

  Fly   820 CPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLNIHMRRHTGEKPFKCDLC 884
            |..|...|:....|.||.:..||..|.    :.|..|....::...:..|.|.|||...|:|.:|
 Worm   415 CSFCNMKFLTPRKLRKHKKMSHVFTKT----FQCHFCEEIFISEVAVMTHERMHTGIIKFECKVC 475

  Fly   885 DMRFTVHYELKVHRRKHTGERPYQCTFCDKDFARPDKLRRHVF 927
            |.|...:..::.|:|...|   |.|..|.:..|...:::.||:
 Worm   476 DFRANRYTAMEEHKRDEHG---YVCAICHERHAEYPEMKHHVY 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10669NP_651388.1 zf-AD 4..80 CDD:462262
C2H2 Zn finger 178..199 CDD:275368
C2H2 Zn finger 216..233 CDD:275368
C2H2 Zn finger 520..542 CDD:275368 1/21 (5%)
C2H2 Zn finger 550..570 CDD:275368 3/25 (12%)
C2H2 Zn finger 579..600 CDD:275368 4/20 (20%)
C2H2 Zn finger 610..630 CDD:275368 0/19 (0%)
C2H2 Zn finger 716..737 CDD:275368 6/20 (30%)
C2H2 Zn finger 746..766 CDD:275368 6/20 (30%)
C2H2 Zn finger 776..795 CDD:275368 3/18 (17%)
C2H2 Zn finger 820..838 CDD:275368 6/17 (35%)
C2H2 Zn finger 853..873 CDD:275368 4/19 (21%)
zf-H2C2_2 866..889 CDD:463886 10/22 (45%)
C2H2 Zn finger 881..901 CDD:275368 6/19 (32%)
zf-H2C2_2 893..918 CDD:463886 6/24 (25%)
C2H2 Zn finger 909..929 CDD:275368 5/19 (26%)
tra-4NP_001370327.1 COG5236 <329..>519 CDD:227561 50/219 (23%)
C2H2 Zn finger 415..436 CDD:275368 6/20 (30%)
C2H2 Zn finger 444..464 CDD:275368 4/19 (21%)
C2H2 Zn finger 472..490 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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