DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10669 and Prdm13

DIOPT Version :10

Sequence 1:NP_651388.1 Gene:CG10669 / 43069 FlyBaseID:FBgn0039329 Length:933 Species:Drosophila melanogaster
Sequence 2:XP_316047.5 Gene:Prdm13 / 1276677 VectorBaseID:AGAMI1_013066 Length:488 Species:Anopheles gambiae


Alignment Length:41 Identity:14/41 - (34%)
Similarity:19/41 - (46%) Gaps:8/41 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 VTPLNSLEKHSWYHGPISRNAAEYLLSSGIN-----GSFLV 210
            ||||.. :.|.|..|.:..|.  |..|..||     |:|::
Mosquito   189 VTPLGD-QGHVWLWGKMHFNM--YTASGWINVLMSIGNFMM 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10669NP_651388.1 zf-AD 4..80 CDD:462262
C2H2 Zn finger 178..199 CDD:275368 5/20 (25%)
C2H2 Zn finger 216..233 CDD:275368
C2H2 Zn finger 520..542 CDD:275368
C2H2 Zn finger 550..570 CDD:275368
C2H2 Zn finger 579..600 CDD:275368
C2H2 Zn finger 610..630 CDD:275368
C2H2 Zn finger 716..737 CDD:275368
C2H2 Zn finger 746..766 CDD:275368
C2H2 Zn finger 776..795 CDD:275368
C2H2 Zn finger 820..838 CDD:275368
C2H2 Zn finger 853..873 CDD:275368
zf-H2C2_2 866..889 CDD:463886
C2H2 Zn finger 881..901 CDD:275368
zf-H2C2_2 893..918 CDD:463886
C2H2 Zn finger 909..929 CDD:275368
Prdm13XP_316047.5 None
Blue background indicates that the domain is not in the aligned region.

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