DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10669 and Znf48

DIOPT Version :10

Sequence 1:NP_651388.1 Gene:CG10669 / 43069 FlyBaseID:FBgn0039329 Length:933 Species:Drosophila melanogaster
Sequence 2:NP_001388702.1 Gene:Znf48 / 103690203 RGDID:9115869 Length:590 Species:Rattus norvegicus


Alignment Length:760 Identity:162/760 - (21%)
Similarity:225/760 - (29%) Gaps:287/760 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 ASVCGSDTTKENVCELCNKVFRYVTNLYRHKQRDHGILGKNGEDYEEDYYKCDLCDKTYKYVMAL 229
            |:|||.          |.|.||.:::|.:| ||.|     .|    |..|||.:|.|.:....|.
  Rat    82 AAVCGE----------CGKSFRQMSDLVKH-QRTH-----TG----EKPYKCGVCGKGFGDSSAR 126

  Fly   230 VKHKHKEHGSSLLSNNSGRKMPSTLAEDANPYSPASISETSTNQSRTNNDSLVHSIIKAVVLSDE 294
            :||:....|     ....|..|........|.|.....|..|                       
  Rat   127 IKHQRTHTG-----EKPYRVRPPAPGPPKMPRSRIPAGERPT----------------------- 163

  Fly   295 DGHSGEDSYYNCDQCSKSYKYIVSLIKHKHKEHLDKESYKQSDDEDDRPLASTSASASAPTAKPS 359
                      .|.:|.||::....|:||: :.|                                
  Rat   164 ----------ICGECGKSFRQSSDLVKHQ-RTH-------------------------------- 185

  Fly   360 RINRRVDGFDFHRSEPNGAKEIKCMICLRRF----TKLRELRNHLQNHPTDFDFEAHGEPIERIA 420
                            .|.|..||.||.:.|    .:::..|.|            .|:.:.|  
  Rat   186 ----------------TGEKPYKCGICGKGFGDSSARIKHQRTH------------RGDQLPR-- 220

  Fly   421 EGFFKTAVESTAEGLKRRIFRDLRMGVYGRYYSITNQARYEMTLDSSDTDSDGDGDDNVVIRRSY 485
                                                                     .||.||..
  Rat   221 ---------------------------------------------------------PVVPRRQP 228

  Fly   486 SCELCDSPEARWPRKYLLHQHHQKEHTWLDAPHVCQRCDSRF-LNLQLLKHHTSQLCQNTLKRFM 549
            |..   :|||         .|..|..   |.|::|..|..|| |:..||.|..|.|..   |.|.
  Rat   229 SQA---APEA---------THRPKAQ---DKPYICTDCGKRFVLSCSLLSHQRSHLGP---KPFG 275

  Fly   550 CDKCPQRFFWRRNLRAHLVEHKCKQESYPCDQCSRSFQDKSAVTKHKLMMHRDSNMELLPCRWCT 614
            ||.|.:.|....:|..||..| ..::.|.|.:|.:.|.|.||..|| |..|  |......|..|.
  Rat   276 CDVCGKEFARGSDLVKHLRVH-TGEKPYLCPECGKGFADSSARVKH-LRTH--SGQRPHACPECN 336

  Fly   615 RTFYRPALLYKHLQRH----GFTGQDLPLAETLLADASKPAG------PKSVQCKICDIQFVSVA 669
            |:|...:.|.:|...|    .|:....|:|..:.:....|.|      |:| ..:..|..|    
  Rat   337 RSFSLSSTLLRHRLTHMEPQDFSFSAYPVAPLIPSPPPPPLGTSPSLTPRS-PSQSSDGPF---- 396

  Fly   670 DLRRHISMQGHSDQPSAYMISTATGFELLLDDTDDSDEETSG-RTYSCDLCDLNFRRRREISEHQ 733
                  .:.|...:|..             ....:.....:| :.:.|..|...|||..::.:| 
  Rat   397 ------GLPGLEPEPGG-------------PQAGEPPPPLAGDKPHKCPECGKGFRRSSDLVKH- 441

  Fly   734 YSLHSFDKLPHNCEHCIFKTVDKNMLHQHLRTQCMNTEKKFACMRCGYKFMWEENLAQHLSTQHS 798
            :.:|:                               .||.:.|..||..|.......:||.| |.
  Rat   442 HRVHT-------------------------------GEKPYLCPECGKGFADSSARVKHLRT-HQ 474

  Fly   799 KQPAVPEQQPPLRRKRRFRYQCPHCWRSFVV-QPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLT 862
            .:...|...|.|.|........|...:|.|. |||             .|.:.::|..||.|...
  Rat   475 GERTRPPPPPTLLRPHNPPGSVPIVPQSRVQGQPS-------------GPSQLHVCGFCGKEFPR 526

  Fly   863 PNKLNIHMRRHTGEKPFKCDLCDMRFTVHYELKVHRRKHTGERPY 907
            .:.|..|.|.||||||:||..|...|........|:|.|...||:
  Rat   527 SSDLVKHRRTHTGEKPYKCAECGKGFGDSSARIKHQRGHLALRPF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10669NP_651388.1 zf-AD 4..80 CDD:462262
C2H2 Zn finger 178..199 CDD:275368 8/20 (40%)
C2H2 Zn finger 216..233 CDD:275368 5/16 (31%)
C2H2 Zn finger 520..542 CDD:275368 10/22 (45%)
C2H2 Zn finger 550..570 CDD:275368 7/19 (37%)
C2H2 Zn finger 579..600 CDD:275368 9/20 (45%)
C2H2 Zn finger 610..630 CDD:275368 6/19 (32%)
C2H2 Zn finger 716..737 CDD:275368 6/20 (30%)
C2H2 Zn finger 746..766 CDD:275368 0/19 (0%)
C2H2 Zn finger 776..795 CDD:275368 6/18 (33%)
C2H2 Zn finger 820..838 CDD:275368 6/18 (33%)
C2H2 Zn finger 853..873 CDD:275368 7/19 (37%)
zf-H2C2_2 866..889 CDD:463886 12/22 (55%)
C2H2 Zn finger 881..901 CDD:275368 5/19 (26%)
zf-H2C2_2 893..918 CDD:463886 5/15 (33%)
C2H2 Zn finger 909..929 CDD:275368
Znf48NP_001388702.1 zf-C2H2 84..105 CDD:395048 11/31 (35%)
C2H2 Zn finger 85..105 CDD:275368 10/30 (33%)
zf-H2C2_2 97..120 CDD:463886 12/32 (38%)
C2H2 Zn finger 113..133 CDD:275368 6/19 (32%)
COG5048 161..571 CDD:227381 132/654 (20%)
C2H2 Zn finger 165..185 CDD:275368 7/20 (35%)
C2H2 Zn finger 193..213 CDD:275368 5/19 (26%)
C2H2 Zn finger 248..268 CDD:275368 8/19 (42%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
C2H2 Zn finger 304..324 CDD:275368 9/20 (45%)
C2H2 Zn finger 332..352 CDD:275368 6/19 (32%)
C2H2 Zn finger 425..445 CDD:275368 6/20 (30%)
C2H2 Zn finger 453..537 CDD:275368 26/97 (27%)
C2H2 Zn finger 545..565 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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