DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHKov2 and C18B10.6

DIOPT Version :10

Sequence 1:NP_651387.1 Gene:CHKov2 / 43068 FlyBaseID:FBgn0039328 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_504924.1 Gene:C18B10.6 / 182773 WormBaseID:WBGene00015963 Length:436 Species:Caenorhabditis elegans


Alignment Length:299 Identity:59/299 - (19%)
Similarity:118/299 - (39%) Gaps:61/299 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VPTSAISKGENYLTIVLRIQIEMQLKDNSIEDVSYILKIPLVPEDEKNDFHEMFDAELDMYDHL- 96
            :|..|.||       ||:...|...:|..::.::.||:      |..|...|.:.. |:.::|. 
 Worm    99 LPYIAFSK-------VLKYTDENGYEDEKLKYLAKILR------DAHNREIETYKL-LEKFNHAN 149

  Fly    97 IPELEDLYAKNTSISPKFKPVHLKFPGEPVKSDYILLEDLRKKGYRNADRTQGLEQFEVEAVLKK 161
            ||     |.|...:.|.:....||        .||:||.:  ........::.:...::.:.::.
 Worm   150 IP-----YTKIYGLKPFYDENDLK--------GYIILEYI--PNIHTTSMSENIPADDLISTIRA 199

  Fly   162 LAQWHAASA-----KRVVELGEYEKDIRESYFTT-----EHQKLLDEF--NINFCMPFLECMQQY 214
            :|.:.|..|     ::...||   .:..|.|:.|     ..:.:||..  :::||          
 Worm   200 VATFGALGACLPADQKTFALG---ANFLEYYYDTFLGAAGVESILDNLRKSLSFC---------- 251

  Fly   215 NLEPGQLVLISDYTSQLTDLNIEFGKNDPL---ELSVLNHGDFWCNNFMFKYKNASEVEDVCFVD 276
              |..::..:.|.......:..:|.|.|.:   .| |.||||.|.:|.:|..:.:..::....:|
 Worm   252 --ETSKVEKLIDIYRHYIKIVSKFSKIDEILGFHL-VPNHGDLWQSNMLFNTEESGHLKLKALID 313

  Fly   277 FQLPKYGTPAQDLLCILMTSPKFSIKLDKFDYFIEYYHQ 315
            :|......|..|::.:.:.:.....:..:...|::.||:
 Worm   314 WQAVANLPPGFDMVRLFIGALSIEDRRQRASEFLKIYHE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHKov2NP_651387.1 EcKL 40..326 CDD:397213 56/292 (19%)
C18B10.6NP_504924.1 DUF1679 21..427 CDD:369592 59/299 (20%)

Return to query results.
Submit another query.