DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10562 and C18B10.6

DIOPT Version :10

Sequence 1:NP_651385.3 Gene:CG10562 / 43066 FlyBaseID:FBgn0039326 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_504924.1 Gene:C18B10.6 / 182773 WormBaseID:WBGene00015963 Length:436 Species:Caenorhabditis elegans


Alignment Length:354 Identity:77/354 - (21%)
Similarity:135/354 - (38%) Gaps:112/354 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DIGSAAGENYATIMLRVKIEVELQDGKSKSVS-------YMVK----------------LPHQVE 76
            |:.||         |::|.......||:|:.:       :|.|                |||:..
 Worm    37 DVESA---------LQMKFRTSATFGKNKTATNISDLKGFMSKIALIEADWQNVEENLQLPHKFA 92

  Fly    77 ----------AIQEMMKRT--NIFEIERTMY---------NEVVPELEALYKAVGVDITFGAKNY 120
                      |..:::|.|  |.:|.|:..|         |..:...:.|.|             
 Worm    93 VKISSQLPYIAFSKVLKYTDENGYEDEKLKYLAKILRDAHNREIETYKLLEK------------- 144

  Fly   121 DLKNAKTDYVALEDLGLKGFKNANRLEG------LDQEHTERVLRKLSQWHAASAVR-VATKGPY 178
             ..:|...|..:  .|||.|.:.|.|:|      :...||..:...:......|.:| |||.|..
 Worm   145 -FNHANIPYTKI--YGLKPFYDENDLKGYIILEYIPNIHTTSMSENIPADDLISTIRAVATFGAL 206

  Fly   179 PKILLQGFFKEESRPVMSEMIKGMGANFVKSCATYE------GHEAYLDKV-KAL---QPVAIDK 233
            ...|          |. .:....:||||::  ..|:      |.|:.||.: |:|   :...::|
 Worm   207 GACL----------PA-DQKTFALGANFLE--YYYDTFLGAAGVESILDNLRKSLSFCETSKVEK 258

  Fly   234 IFE-----------FAKV-EPTEFNVL-NHGDSWSNNIMFQYDAFGKIKEVYLVDYQLPKYGTVA 285
            :.:           |:|: |...|::: ||||.|.:|::|..:..|.:|...|:|:|........
 Worm   259 LIDIYRHYIKIVSKFSKIDEILGFHLVPNHGDLWQSNMLFNTEESGHLKLKALIDWQAVANLPPG 323

  Fly   286 QDLLYFLLSSTKLEDKLAKFDYYIKIYHD 314
            .|::...:.:..:||:..:...::||||:
 Worm   324 FDMVRLFIGALSIEDRRQRASEFLKIYHE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10562NP_651385.3 EcKL 41..325 CDD:397213 74/348 (21%)
C18B10.6NP_504924.1 DUF1679 21..427 CDD:369592 77/354 (22%)

Return to query results.
Submit another query.