DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13659 and nhr-246

DIOPT Version :10

Sequence 1:NP_651378.1 Gene:CG13659 / 43059 FlyBaseID:FBgn0039319 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001256661.1 Gene:nhr-246 / 191499 WormBaseID:WBGene00014192 Length:386 Species:Caenorhabditis elegans


Alignment Length:414 Identity:81/414 - (19%)
Similarity:148/414 - (35%) Gaps:131/414 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 YASIMFRARVEYTAQNGNFTKSLIIK-------TMIVEE---GIKK------DMFKDSPLFTTEI 100
            :.|::.:.|:.:  .|.:..|.:::|       ..:||.   |:|.      :.|    :..||.
 Worm    43 FMSLLRKVRLHF--DNDDLPKHVVLKIPQNTKGCSVVENAGGGVKNVDHSVVERF----MHNTEC 101

  Fly   101 GMYTKVLPEWERILR--------RANDPAKLYV-------ECIYHSLQP----HQIL-IFDDLVE 145
            ..|.......|:.|:        :|.:.|.:.|       :|..|.|.|    .|:. |.|:||:
 Worm   102 NYYKLFSSLSEKPLQIPTTYLASKAGEKAPVPVIVLEMLEDCKLHDLIPGFNEDQLFKIVDELVK 166

  Fly   146 MG-YAVVRDRFLTREEISSAYSKLAKIHAISMKFIHEQPEYLKEFKNGLCEMPGLIDSSIISGGM 209
            :. :::..:::   :||....||||                          |.|.:...:...| 
 Worm   167 LHIFSLTTEKW---KEIVPDESKLA--------------------------MSGFLQCMVADVG- 201

  Fly   210 DPFMEMLGRIPELS---KYQPHFKKISLHFKDRLRETMQEYRNNPQPGYNVLCHADFHSRNMMF- 270
                ..|.:.|||.   .|..:......::..::|:   ||.|..:|  :|:||.|..:..::: 
 Worm   202 ----RKLAQNPELGVILSYVENTLDTDPNYLQKMRD---EYINEERP--SVICHGDLWAPQILWD 257

  Fly   271 KNNKETGCFEDCMLLDYQGCNVAPMAVDLMYSIYMLMGPAQRREELDILLNYYLSILLETLKKIG 335
            |.:...|      ::|:|..:......||.:.:........|:.....||::|.:.|...||:.|
 Worm   258 KEDNIAG------IVDWQATHRGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYYNKLKVGLKEKG 316

  Fly   336 YQGSMPTEQ--------------------GFWAEMKRHRYYEFLLLSTFLPVSIGLRTHKLDIGD 380
            ::.:...|:                    ||||..               ||   |:|......:
 Worm   317 FKTTWTREEIDIEYNYSFIYGASRTIFANGFWANS---------------PV---LQTDGKPDPE 363

  Fly   381 MMHNEETRKKLYQLEDFMEETKSI 404
            .:.....|.|.| |||.:.|...|
 Worm   364 RIKESFVRCKSY-LEDTIRELNII 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13659NP_651378.1 EcKL 48..336 CDD:397213 63/324 (19%)
nhr-246NP_001256661.1 CHK 134..314 CDD:214734 45/224 (20%)

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