DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31097 and nhr-246

DIOPT Version :10

Sequence 1:NP_733093.2 Gene:CG31097 / 43058 FlyBaseID:FBgn0051097 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001256661.1 Gene:nhr-246 / 191499 WormBaseID:WBGene00014192 Length:386 Species:Caenorhabditis elegans


Alignment Length:278 Identity:56/278 - (20%)
Similarity:100/278 - (35%) Gaps:73/278 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 FASVMLRVYLDIVMKDGSQKRKSYVVK--------TMLESDKGGKAVNEMRYFHKEQQMYSTYLP 106
            |.|::.:|.|..   |.....|..|:|        :::|:..||  |..:.:...|:.|::|...
 Worm    43 FMSLLRKVRLHF---DNDDLPKHVVLKIPQNTKGCSVVENAGGG--VKNVDHSVVERFMHNTECN 102

  Fly   107 QFEKIYRVAGHPVQ-----LMPKCLEIGEIDGNIYFIFEDLSTRNFVAADRTKGVNMEHMRLSLR 166
            .::....::..|:|     |..|..|...:...:..:.||....:.:     .|.|.:.:...:.
 Worm   103 YYKLFSSLSEKPLQIPTTYLASKAGEKAPVPVIVLEMLEDCKLHDLI-----PGFNEDQLFKIVD 162

  Fly   167 KLAELHAASVIYKERYGPYHADFDNGFARKDKIEHSVRRFEVKAPEYKAAMKTWGIDECYL---- 227
            :|.:||..|:.                ..|.|        |:...|.|.||.  |..:|.:    
 Worm   163 ELVKLHIFSLT----------------TEKWK--------EIVPDESKLAMS--GFLQCMVADVG 201

  Fly   228 KNFPTTEQYGKLCL---ESLNVDPQDF-------------NVLTHGDFSPSNILFKYNENGAPSE 276
            :......:.|.:..   .:|:.||...             :|:.|||.....||:...:|.|.  
 Worm   202 RKLAQNPELGVILSYVENTLDTDPNYLQKMRDEYINEERPSVICHGDLWAPQILWDKEDNIAG-- 264

  Fly   277 ALILDFQICKWASPTQDL 294
              |:|:|.....||.:||
 Worm   265 --IVDWQATHRGSPMEDL 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31097NP_733093.2 EcKL 46..331 CDD:397213 56/278 (20%)
nhr-246NP_001256661.1 CHK 134..314 CDD:214734 36/182 (20%)

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