DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11893 and pkdc

DIOPT Version :10

Sequence 1:NP_651375.1 Gene:CG11893 / 43056 FlyBaseID:FBgn0039316 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_001335286.1 Gene:pkdc / 797003 ZFINID:ZDB-GENE-041111-115 Length:322 Species:Danio rerio


Alignment Length:233 Identity:52/233 - (22%)
Similarity:90/233 - (38%) Gaps:48/233 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SLEPRQVLIFEDLVPQGYFVIRDRPINMNEYKNVFSKLAKWHAVSMKVLNEQPDILKDFKYGLME 199
            |....|:::.|||...| |.:|...:|..|.|...|.:|.:||:.:.|..|          ||..
Zfish   103 SFGEEQLIVLEDLDVAG-FPVRKTYVNDAEIKACLSWIANFHALFLDVTPE----------GLWP 156

  Fly   200 MPSIMSDPMVTTGMDNFLKMMDQIPELTKYKPHFEKIKENYIQRMGDVMQEYRKNVQSDGYYVMC 264
            :.:...              ::..||      ..|.:.:..::.....:.....|.:   :..:.
Zfish   157 IGTYWH--------------LETRPE------ELEAMSDQKLKAAAGEIDSILNNCR---FKTIV 198

  Fly   265 HGDFHGRNMMFNKNE-EVMFVDFQI----CNLCPITIDLSYSVYMLMEPEQRWDLGKDLINFYFS 324
            |||....|..|:|:. :|..||||.    |.:    .|:.|.:...|:..:.......|:::|||
Zfish   199 HGDAKLANFCFSKDGLQVASVDFQYVGGGCGM----KDVIYFLGSCMDERECEKKAPGLLDYYFS 259

  Fly   325 VLEDTLKKVGYKGKMPTNDGLWKQIHRHKFYDF--FLL 360
            .|..:|:|   |......:..|:.:....:.||  |||
Zfish   260 ELRKSLEK---KVDFAELEKEWRNMFAFAWTDFHRFLL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11893NP_651375.1 EcKL 52..335 CDD:397213 45/204 (22%)
pkdcXP_001335286.1 Protein Kinases, catalytic domain <96..267 CDD:473864 44/201 (22%)

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