DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13658 and pkdc

DIOPT Version :10

Sequence 1:NP_651374.2 Gene:CG13658 / 43055 FlyBaseID:FBgn0039315 Length:422 Species:Drosophila melanogaster
Sequence 2:XP_001335286.1 Gene:pkdc / 797003 ZFINID:ZDB-GENE-041111-115 Length:322 Species:Danio rerio


Alignment Length:236 Identity:58/236 - (24%)
Similarity:96/236 - (40%) Gaps:48/236 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SLEPHQVMIFEDLVPQGYTVIRDRYPNKEELQKAFFKLAKWHAASMKVLNERPDFLKEFKYGLWG 199
            |....|:::.|||...|:.| |..|.|..|::.....:|.:||..:.|..|          |||.
Zfish   103 SFGEEQLIVLEDLDVAGFPV-RKTYVNDAEIKACLSWIANFHALFLDVTPE----------GLWP 156

  Fly   200 MPNFLNDSIVTTGVPCFLEMLDKVPELTKYKPYFEKIKDNYIQQMSAVMEEYRTNPKPNRYYVLC 264
            :..:.:              |:..||      ..|.:.|   |::.|...|..:.....|:..:.
Zfish   157 IGTYWH--------------LETRPE------ELEAMSD---QKLKAAAGEIDSILNNCRFKTIV 198

  Fly   265 HGDFHGRNMMFRYNKETGSFEDVMLVDFQ-ISNVCPLSIDLIYSIFMVMDTEDRWDLGKEYINYY 328
            |||....|  |.::|:.   ..|..|||| :...|.:. |:||.:...||..:........::||
Zfish   199 HGDAKLAN--FCFSKDG---LQVASVDFQYVGGGCGMK-DVIYFLGSCMDERECEKKAPGLLDYY 257

  Fly   329 FSVLADTL-KKIGFKGEMPTQTGVWEHIHGH--KDYEFFMM 366
            ||.|..:| ||:.| .|:..:   |.::...  .|:..|::
Zfish   258 FSELRKSLEKKVDF-AELEKE---WRNMFAFAWTDFHRFLL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13658NP_651374.2 EcKL 52..341 CDD:397213 53/207 (26%)
pkdcXP_001335286.1 Protein Kinases, catalytic domain <96..267 CDD:473864 51/203 (25%)

Return to query results.
Submit another query.