DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11878 and pkdc

DIOPT Version :10

Sequence 1:NP_651369.1 Gene:CG11878 / 43050 FlyBaseID:FBgn0039310 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_001335286.1 Gene:pkdc / 797003 ZFINID:ZDB-GENE-041111-115 Length:322 Species:Danio rerio


Alignment Length:201 Identity:43/201 - (21%)
Similarity:73/201 - (36%) Gaps:42/201 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 ERDSIIFEDMSLDHYKVACRRKKLDLEHTHLVLEKLALFHAASSVLAERQPGIFDKNYDRGFFNK 199
            |...|:.||:.:..:.|  |:..::.......|..:|.|||           :|......|.:..
Zfish   106 EEQLIVLEDLDVAGFPV--RKTYVNDAEIKACLSWIANFHA-----------LFLDVTPEGLWPI 157

  Fly   200 HTRAYAPIMTNLLEALSRSLASDEELGQRYKA---KIDRLVERLMDYGERSTTSSPGDFLTLAHG 261
            .|..:.......|||:|         .|:.||   :||.::....             |.|:.||
Zfish   158 GTYWHLETRPEELEAMS---------DQKLKAAAGEIDSILNNCR-------------FKTIVHG 200

  Fly   262 DLWTTNFMFQYDAKEHPTNAIFIDFQFSVWNSPAIDLHYFFSTSLQDNLRLEHQTELVQFYYYRL 326
            |....||.|..|..:    ...:|||:........|:.||..:.:.:....:....|:.:|:..|
Zfish   201 DAKLANFCFSKDGLQ----VASVDFQYVGGGCGMKDVIYFLGSCMDERECEKKAPGLLDYYFSEL 261

  Fly   327 TEALRK 332
            .::|.|
Zfish   262 RKSLEK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11878NP_651369.1 EcKL 47..335 CDD:397213 43/201 (21%)
pkdcXP_001335286.1 Protein Kinases, catalytic domain <96..267 CDD:473864 42/199 (21%)

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