DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11878 and E02C12.8

DIOPT Version :9

Sequence 1:NP_651369.1 Gene:CG11878 / 43050 FlyBaseID:FBgn0039310 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001379850.1 Gene:E02C12.8 / 179320 WormBaseID:WBGene00017093 Length:141 Species:Caenorhabditis elegans


Alignment Length:66 Identity:19/66 - (28%)
Similarity:27/66 - (40%) Gaps:12/66 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 RGFYAVFCSLIFEPVMQ--YEGKE-------DASIEQVLSSSESGMRFKNSV-YESENIKKKLSV 406
            :||.:....|  ||..|  .||||       ..|.:..|.:....|.|:... :..|.:||..|:
 Worm    47 KGFMSRIACL--EPDWQNIEEGKELPSKFALKISSQLALVALSKIMNFEEGAGFSEEKLKKFSSL 109

  Fly   407 T 407
            |
 Worm   110 T 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11878NP_651369.1 EcKinase 47..335 CDD:281023
E02C12.8NP_001379850.1 PKc_like 3..>141 CDD:419665 19/66 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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