DRSC/TRiP Functional Genomics Resources

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Protein Alignment RIOK2 and SPBC1703.05

DIOPT Version :9

Sequence 1:NP_651365.1 Gene:RIOK2 / 43046 FlyBaseID:FBgn0039306 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_596200.2 Gene:SPBC1703.05 / 2539957 PomBaseID:SPBC1703.05 Length:344 Species:Schizosaccharomyces pombe


Alignment Length:346 Identity:167/346 - (48%)
Similarity:238/346 - (68%) Gaps:12/346 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLNVTVLRYLTKEDFRVLTAIEMGMKNHELVPGPLAAAIANLKSGGVHKLLKELCKHKLLAYE 65
            |..||:..:|||:.||||.|||:|||.:|||:||..:...||.::.|...|.|..|..|||:|..
pombe     1 MVNLNIKAMRYLSAEDFRTLTAVEMGSRNHEVVPTNMINQIAKIRGGSCTKSLSVLFMHKLIAKV 65

  Fly    66 RGKKYDGYRLTNTGYDYLALKSLTLRGSVSSFGNQIGIGKESNIYVVADEEGTPICLKLHRLGRT 130
            ....|:|||||..||||||||:|:.|.||.|.|||||:||||::|||.|::|....||:|||||.
pombe    66 PHISYEGYRLTYAGYDYLALKALSKRASVYSVGNQIGVGKESDVYVVGDQKGKQYILKIHRLGRI 130

  Fly   131 CFRNVKAKRDYHGRRHKASWLYLSRISATREFAYMSALYDRGFPVPKPIDFNRHCVLMDLVKGWP 195
            .||:||..|||...|...||.||||::||:|||:|..|::.|||||.|||.:|||::|:::..:|
pombe   131 SFRSVKNNRDYLRNRKTGSWQYLSRLAATKEFAFMKILHEHGFPVPAPIDHSRHCIIMEMIDAFP 195

  Fly   196 MTQVHELLDAPQVYDDLMNLIVRLGNSGVIHGDFNEFNLMVTDAGKPILIDFPQMMSTSHENAEF 260
            :..|.::.|.|.:|..||::|||...:|:|||||||||::|.:.|..::||||||:||||.:|:|
pombe   196 LRAVTDIRDPPALYQTLMDIIVRFARNGLIHGDFNEFNIIVREDGTAVVIDFPQMVSTSHPDAQF 260

  Fly   261 FFERDVNCVREMFRRKFGYESEDYPKFSD---LVREDDLDAEVHCTGYGFTKEMEQDLLEEYGMV 322
            :|:|||.|:.:.|.:.:.|:. |.|.|.|   :.:|::||..:..:  ||.|:..:: ||:|...
pombe   261 YFDRDVQCIVQYFEKNYQYKG-DVPNFEDISKMEKENNLDIMIEAS--GFNKKQSKE-LEKYRQE 321

  Fly   323 DQADEEDEGEDL----EEEEE 339
            ::..:|: |:||    |||||
pombe   322 EEKRKEN-GDDLSDNYEEEEE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIOK2NP_651365.1 RIO2 3..282 CDD:223554 144/278 (52%)
Rio2_N 9..91 CDD:286310 43/81 (53%)
RIO2_C 94..276 CDD:270695 96/181 (53%)
SPBC1703.05NP_596200.2 RIO2 7..316 CDD:223554 152/312 (49%)
Rio2_N 9..91 CDD:286310 43/81 (53%)
RIO2_C 94..275 CDD:270695 96/180 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 202 1.000 Domainoid score I644
eggNOG 1 0.900 - - E1_COG0478
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6760
Inparanoid 1 1.050 334 1.000 Inparanoid score I508
OMA 1 1.010 - - QHG53873
OrthoFinder 1 1.000 - - FOG0005212
OrthoInspector 1 1.000 - - oto100788
orthoMCL 1 0.900 - - OOG6_101547
Panther 1 1.100 - - LDO PTHR45852
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1103
SonicParanoid 1 1.000 - - X3725
TreeFam 1 0.960 - -
1413.860

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