DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11857 and ATRER1A

DIOPT Version :10

Sequence 1:NP_001303417.1 Gene:CG11857 / 43042 FlyBaseID:FBgn0039303 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_195633.1 Gene:ATRER1A / 830077 AraportID:AT4G39220 Length:191 Species:Arabidopsis thaliana


Alignment Length:184 Identity:92/184 - (50%)
Similarity:123/184 - (66%) Gaps:9/184 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DSSAAGGGGVKKFFQRLS----QTYQSALDRSTPHTRMRWVFAGFLLLLFVLRIFIYQGWYIVCY 65
            |.|....|.|....|:.:    :.||..||::|||...||:....:.|::.||::..||:||:.|
plant     2 DESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYIIAY 66

  Fly    66 ALGIYHLNLFIAFLTPKIDPEFDPYSQDDEDEGPNLPTRSNEEFRPFIRRLPEFKFWLSVAKSTL 130
            .||||.|||.|.||:|.:|||....|     :||:||||.::||:||||||||||||.|:.|:..
plant    67 GLGIYLLNLLIGFLSPLVDPEAGGVS-----DGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFC 126

  Fly   131 IGLICTFFDFFNVPVFWPILVMYFITLFCITMKRQIKHMIKYKYLPFTRNKPRY 184
            |..:.|||..|:||||||||:.|:|.||.:||:|||.|||||||:||:..|.:|
plant   127 IAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11857NP_001303417.1 Rer1 16..185 CDD:460860 88/173 (51%)
ATRER1ANP_195633.1 Rer1 17..181 CDD:460860 87/169 (51%)

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