Sequence 1: | NP_001247302.1 | Gene: | Nup358 / 43041 | FlyBaseID: | FBgn0039302 | Length: | 2718 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006712857.2 | Gene: | RGPD5 / 84220 | HGNCID: | 32418 | Length: | 1791 | Species: | Homo sapiens |
Alignment Length: | 2352 | Identity: | 509/2352 - (21%) |
---|---|---|---|
Similarity: | 840/2352 - (35%) | Gaps: | 762/2352 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 EVDAHVHKMLGKLQPG-------RERDIKGLAVARLYMKVQEYPKAIEYLNGYLRVRD-DAVGHN 63
Fly 64 MIATCYSRLNPPDVTEALQHYQRSIQIDPRQSEVVIDACELLVKENNASITE-CARYWLDQANSL 127
Fly 128 DLSGNKQVFNLRMRVNLADSNGERDDTSGGDGEQNTLEILMYKELQARPQDVNIRIQLLRSYVEK 192
Fly 193 MKIDQAF--------NYALKTELESKNCTSQSNEWYEQIWMVLFKIEMAKDVKKNWRFWHFALHT 249
Fly 250 -----LDRLVQLSLEGSGLADSSKQLFRLDQYLFKFSTSIERSGDAPQRDLHQACIDHFTGQLLL 309
Fly 310 HAVTLIFKREVLANKNKWMSTLRSALPLLLLGYQVRPIDDSSTNQWIKHCDAEQKQLIQMWRPQG 374
Fly 375 AFRCAQLGRTLLGCLDRSQMEIKNDRENAEFDENKNSGNSMPGLFADSEELLASAHQQCLDKSWR 439
Fly 440 SQIYQQLFTHAEHKLKDTS---SHLVRNLRLQLPLFEWPNLAHIENYELQALVLPPHSLAQHVYL 501
Fly 502 ALGTDPNKLGDAPRVVFYEGFQRDVKQ----------NLNYCGQDSISQVDVDLYL----YATTI 552
Fly 553 QTRRKLQIQREVYDSSNLGNRNAAARPHMMPFANLVGQLGAPEQSNWWDLVVRLNSNQLITEGNR 617
Fly 618 AE-----------QRAQLQHGLEAVRGVNGPKADAIIIFQLGKILNS---------RS------- 655
Fly 656 -------DRSSLEARIDTLYRQGFSILRHQHNQQMESYVRVFKYGSAGSTAAWQD-LQSLAEEAV 712
Fly 713 TYFSEKMFRIGQYEQFLDEVRGLHLPMAYFLQSEACHHLEESSKLPRTSRDRYSERRREC---LQ 774
Fly 775 KTQ----KLIKNDDKH-----PLIAAMHRHQQDRNS---RGIDNSFGSPDVHNNSSAYEDAEDDF 827
Fly 828 YSHAAFSANR----SRRQLEVTPVTPIVMAQPSQEMEQAVKQISKSLCVLKDDVSVGMEAMRQDI 888
Fly 889 KVLTEKFTGLEDLLKKIKISSRDTPTRDVDPAAALGLDDLFIIEDALAEHQQQQQHQQQQSHNQG 953
Fly 954 AIHPVVPNPYT-SGFYNGMPNTPSAQERFLQGPYGSPMFNQNQMYNYYAAQAQAQAQAQFLRTPP 1017
Fly 1018 APGSIPPPNMFGPRNPNFGLPSMFPPPTVPSVAPYIDAMGNFTQPPPSLIPPPAQPAAPPAPLNI 1082
Fly 1083 LESKPVVALPTPGFFNTTTPVFGASPIQVPQSKPLTVPTVPIPSTAPAPPIAGTVNPPATTAVPP 1147
Fly 1148 PVHIPQVAPSVPAQPPAPAPVSVPSMFNRALNNQPVEKEPPANVVITSSDPLPKPTTASVQPTLS 1212
Fly 1213 VTIPAQHIKPSLVQAPEQPAQSAQPAQPSVSGVGSLSFNFGSK-------SSESPFSFKTQVAKA 1270
Fly 1271 AAEKQKEQEEAEQNQSGATDPNKTLPQDTSADDYDPRPDFKPIIPLPDEVEVRTGEEGEDIKFTS 1335
Fly 1336 RAKLFRYVD---KEWKERGTGVIKILCDKATGVSRVLMRRDQTHKVCANHTITADITINVANQDK 1397
Fly 1398 DKKSLLWAANDFADEQVTLERFLVRFKTGELAEEFRVAFTK------------------ASEAAK 1444
Fly 1445 SKETVKPTVNTAEKGSTATAPAAFKSFVTS----------------TPAANSLINKPQEQTKTQP 1493
Fly 1494 -----NPDPPATAAKSLFGTLSVSAAPATSAPASATPFASFSFTPNGSSGFGTSTASPFGNLSFG 1553
Fly 1554 TASAVGSGNNTTLFTTALIKDNTVQGKTLQQESQLNKSNSS-DAEEEYVPTAQ-------FVPVI 1610
Fly 1611 ALPDIVEVVTGEENEDVLFEHRAKLLRWDKEANEWKERGLGNMKLLRDRTDPNKVRLLMRREQVH 1675
Fly 1676 KLCCNQRLLPETKFTYATNCKAAVTWGAQDYSDEELTTALLAVRFKSQDICQQFLEAVQKAQQSI 1740
Fly 1741 GNEPKKEEVPSAAGEKEKPIKGFGDAFKPKAGSWNCQACYTNNGQDQLYCLACQEPKDATVPPKQ 1805
Fly 1806 SGLDQGNALNLTTSSSNKFSFGFASSATLPATGGFSFGGATQPKEKPAVAVVTASASAPTSVQTA 1870
Fly 1871 ALGFGKSSMTSGFGDAFKPAVGSWSCSACYVNNPGESLYCSACDAPKNDTVPQKEKSLGSGLNLP 1935
Fly 1936 PTSKFSFGFGAAAAGDKDQAGDGATFNF---AAMPAAVAPTTSIGSSSFTFSMTKPKPDQQQPNS 1997
Fly 1998 TAAKEDED---NDSQEVEEEENNTYFSPVIPLPDKIDVKTGEEDEELLYVHKAKLYRLNESDWKE 2059
Fly 2060 RGLGDVKILRHRQTKKLRVVMRREQVFKIC--LNHVLNE----NVVYREKTETSWMFAVHDFSEG 2118
Fly 2119 ESVLERFTLRFKNKEVAQGFMEAIKNALNE--TAKPIEDS----PVVGSVSQSTEANK------P 2171
Fly 2172 SQKNDGAAKSRG 2183 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup358 | NP_001247302.1 | TPR | <14..128 | CDD:223533 | 33/122 (27%) |
TPR repeat | 58..90 | CDD:276809 | 7/31 (23%) | ||
Atrophin-1 | <1030..1308 | CDD:331285 | 35/284 (12%) | ||
RanBD1_RanBP2_insect-like | 1324..1442 | CDD:269992 | 55/138 (40%) | ||
RanBD2_RanBP2_insect-like | 1620..1737 | CDD:269993 | 49/116 (42%) | ||
RanBP2-type Zn finger | 1774..1793 | CDD:275376 | 0/18 (0%) | ||
Nucleoporin_FG2 | 1806..>1986 | CDD:330420 | 32/182 (18%) | ||
RanBP2-type Zn finger | 1833..1861 | CDD:275375 | 4/27 (15%) | ||
zf-RanBP | 1891..1917 | CDD:279035 | 3/25 (12%) | ||
RanBP2-type Zn finger | 1894..1913 | CDD:275376 | 3/18 (17%) | ||
RanBD3_RanBP2_insect-like | 2034..2148 | CDD:269994 | 23/119 (19%) | ||
RanBD4_RanBP2_insect-like | 2571..2694 | CDD:269995 | |||
RGPD5 | XP_006712857.2 | TPR_11 | 85..152 | CDD:290150 | 20/72 (28%) |
TPR repeat | 85..115 | CDD:276809 | 7/31 (23%) | ||
TPR_1 | 86..118 | CDD:278916 | 6/33 (18%) | ||
YRB1 | 1001..1193 | CDD:227499 | 77/210 (37%) | ||
RanBD2_RanBP2-like | 1077..1193 | CDD:269998 | 55/118 (47%) | ||
RanBD3_RanBP2-like | 1374..1490 | CDD:270204 | 49/116 (42%) | ||
Rab_bind | 1667..1731 | CDD:293309 | 17/102 (17%) | ||
GRIP | 1733..1775 | CDD:279767 | 10/41 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 138 | 1.000 | Domainoid score | I4839 |
eggNOG | 1 | 0.900 | - | - | E1_COG5171 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 524 | 1.000 | Inparanoid score | I1253 |
Isobase | 1 | 0.950 | - | 0.664386 | Normalized mean entropy | S1079 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D111047at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000925 | |
OrthoInspector | 1 | 1.000 | - | - | otm40852 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104909 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2180 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.680 |