Sequence 1: | NP_001247302.1 | Gene: | Nup358 / 43041 | FlyBaseID: | FBgn0039302 | Length: | 2718 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157935.1 | Gene: | RGPD8 / 727851 | HGNCID: | 9849 | Length: | 1765 | Species: | Homo sapiens |
Alignment Length: | 2356 | Identity: | 512/2356 - (21%) |
---|---|---|---|
Similarity: | 845/2356 - (35%) | Gaps: | 773/2356 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFTTRKEVDAHVHKMLGKLQPGRERDIKGLAVARLYMKVQEYPKAIEYLNGYLRVRD-DAVGHNM 64
Fly 65 IATCYSRLNPPDVTEALQHYQRSIQIDPRQSEVVIDACELLVKENNASITE-CARYWLDQANSLD 128
Fly 129 LSGNKQVFNLRMRVNLADSNGERDDTSGGDGEQNTLEILMYKELQARPQDVNIRIQLLRSYVEKM 193
Fly 194 KIDQAF--------NYALKTELESKNCTSQSNEWYEQIWMVLFKIEMAKDVKKNWRFWHFALHT- 249
Fly 250 ----LDRLVQLSLEGSGLADSSKQLFRLDQYLFKFSTSIERSGDAPQRDLHQACIDHFTGQLLLH 310
Fly 311 AVTLIFKREVLANKNKWMSTLRSALPLLLLGYQVRPIDDSSTNQWIKHCDAEQKQLIQMWRPQGA 375
Fly 376 FRCAQLGRTLLGCLDRSQMEIKNDRENAEFDENKNSGNSMPGLFADSEELLASAHQQCLDKSWRS 440
Fly 441 QIYQQLFTHAEHKLKDTS---SHLVRNLRLQLPLFEWPNLAHIENYELQALVLPPHSLAQHVYLA 502
Fly 503 LGTDPNKLGDAPRVVFYEGFQRDVKQ----------NLNYCGQDSISQVDVDLYL----YATTIQ 553
Fly 554 TRRKLQIQREVYDSSNLGNRNAAARPHMMPFANLVGQLGAPEQSNWWDLVVRLNSNQLITEGNRA 618
Fly 619 E-----------QRAQLQHGLEAVRGVNGPKADAIIIFQLGKILNS---------RS-------- 655
Fly 656 ------DRSSLEARIDTLYRQGFSILRHQHNQQMESYVRVFKYGSAGSTAAWQD-LQSLAEEAVT 713
Fly 714 YFSEKMFRIGQYEQFLDEVRGLHLPMAYFLQSEACHHLEESSKLPRTSRDRYSERRREC---LQK 775
Fly 776 TQ----KLIKNDDKH-----PLIAAMHRHQQDRNS---RGIDNSFGSPDVHNNSSAYEDAEDDFY 828
Fly 829 SHAAFSANR----SRRQLEVTPVTPIVMAQPSQEMEQAVKQISKSLCVLKDDVSVGMEAMRQDIK 889
Fly 890 VLTEKFTGLEDLLKKIKISSRDTPTRDVDPAAALGLDDLFIIEDALAEHQQQQQHQQQQSHNQGA 954
Fly 955 IHPVVPNPYT-SGFYNGMPNTPSAQERFLQGPYGSPMFNQNQMYNYYAAQAQAQAQAQFLRTPPA 1018
Fly 1019 PGSIPPPNMFGPRNPNFGLPSMFPPPTVPSVAPYIDAMGNFTQPPPSLIPPPAQPAAPPAPLNIL 1083
Fly 1084 ESKPVVALPTPGFFNTTTPVFGASPIQVPQSKPLTVPTVPIPSTAPAPPIAGTVNPPATTAVPPP 1148
Fly 1149 VHIPQVAPSVPAQPPAPAPVSVPSMFNRALNNQPVEKEPPANVVITSSDPLPKPTTASVQPTLSV 1213
Fly 1214 TIPAQHIK-----PSLVQAPEQPAQSAQPAQPSVSGVGSLSFNFGSK-------SSESPFSFKTQ 1266
Fly 1267 VAKAAAEKQKEQEEAEQNQSGATDPNKTLPQDTSADDYDPRPDFKPIIPLPDEVEVRTGEEGEDI 1331
Fly 1332 KFTSRAKLFRYVD---KEWKERGTGVIKILCDKATGVSRVLMRRDQTHKVCANHTITADITINVA 1393
Fly 1394 NQDKDKKSLLWAANDFADEQVTLERFLVRFKTGELAEEFRVAFTK------------------AS 1440
Fly 1441 EAAKSKETVKPTVNTAEKGSTATAPAAFKSFVTS----------------TPAANSLINKPQEQT 1489
Fly 1490 KTQP-----NPDPPATAAKSLFGTLSVSAAPATSAPASATPFASFSFTPNGSSGFGTSTASPFGN 1549
Fly 1550 LSFGTASAVGSGNNTTLFTTALIKDNTVQGKTLQQESQLNKSNSS-DAEEEYVPTAQ-------F 1606
Fly 1607 VPVIALPDIVEVVTGEENEDVLFEHRAKLLRWDKEANEWKERGLGNMKLLRDRTDPNKVRLLMRR 1671
Fly 1672 EQVHKLCCNQRLLPETKFTYATNCKAAVTWGAQDYSDEELTTALLAVRFKSQDICQQFLEAVQKA 1736
Fly 1737 QQSIGNEPKKEEVPSAAGEKEKPIKGFGDAFKPKAGSWNCQACYTNNGQDQLYCLACQEPKDATV 1801
Fly 1802 PPKQSGLDQGNALNLTTSSSNKFSFGFASSATLPATGGFSFGGATQPKEKPAVAVVTASASAPTS 1866
Fly 1867 VQTAALGFGKSSMTSGFGDAFKPAVGSWSCSACYVNNPGESLYCSACDAPKNDTVPQKEKSLGSG 1931
Fly 1932 LNLPPTSKFSFGFGAAAAGDKDQAGDGATFNF---AAMPAAVAPTTSIGSSSFTFSMTKPKPDQQ 1993
Fly 1994 QPNSTAAKEDED---NDSQEVEEEENNTYFSPVIPLPDKIDVKTGEEDEELLYVHKAKLYRLNES 2055
Fly 2056 DWKERGLGDVKILRHRQTKKLRVVMRREQVFKIC--LNHVLNE----NVVYREKTETSWMFAVHD 2114
Fly 2115 FSEGESVLERFTLRFKNKEVAQGFMEAIKNAL-----------NETAKPI---------EDSPVV 2159
Fly 2160 GSVSQSTEANKPSQKN 2175 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup358 | NP_001247302.1 | TPR | <14..128 | CDD:223533 | 33/115 (29%) |
TPR repeat | 58..90 | CDD:276809 | 7/31 (23%) | ||
Atrophin-1 | <1030..1308 | CDD:331285 | 36/289 (12%) | ||
RanBD1_RanBP2_insect-like | 1324..1442 | CDD:269992 | 55/138 (40%) | ||
RanBD2_RanBP2_insect-like | 1620..1737 | CDD:269993 | 49/116 (42%) | ||
RanBP2-type Zn finger | 1774..1793 | CDD:275376 | 0/18 (0%) | ||
Nucleoporin_FG2 | 1806..>1986 | CDD:330420 | 32/182 (18%) | ||
RanBP2-type Zn finger | 1833..1861 | CDD:275375 | 4/27 (15%) | ||
zf-RanBP | 1891..1917 | CDD:279035 | 3/25 (12%) | ||
RanBP2-type Zn finger | 1894..1913 | CDD:275376 | 3/18 (17%) | ||
RanBD3_RanBP2_insect-like | 2034..2148 | CDD:269994 | 23/130 (18%) | ||
RanBD4_RanBP2_insect-like | 2571..2694 | CDD:269995 | |||
RGPD8 | NP_001157935.1 | TPR 1 | 26..59 | 11/32 (34%) | |
TPR_11 | 59..126 | CDD:290150 | 20/72 (28%) | ||
TPR repeat | 59..89 | CDD:276809 | 7/31 (23%) | ||
TPR 2 | 60..93 | 7/34 (21%) | |||
TPR_1 | 60..92 | CDD:278916 | 6/33 (18%) | ||
TPR 3 | 648..681 | 11/42 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 760..804 | 10/49 (20%) | |||
YRB1 | 975..1167 | CDD:227499 | 77/210 (37%) | ||
RanBD2_RanBP2-like | 1051..1167 | CDD:269998 | 55/118 (47%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1216..1247 | 5/31 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1306..1330 | 8/23 (35%) | |||
RanBD3_RanBP2-like | 1348..1464 | CDD:270204 | 49/116 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1580..1621 | 9/41 (22%) | |||
Rab_bind | 1641..1705 | CDD:293309 | 17/102 (17%) | ||
GRIP | 1707..1749 | CDD:279767 | 7/41 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1746..1765 | 6/20 (30%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 138 | 1.000 | Domainoid score | I4839 |
eggNOG | 1 | 0.900 | - | - | E1_COG5171 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 524 | 1.000 | Inparanoid score | I1253 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000925 | |
OrthoInspector | 1 | 1.000 | - | - | otm40852 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104909 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2180 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.720 |