Sequence 1: | NP_001247302.1 | Gene: | Nup358 / 43041 | FlyBaseID: | FBgn0039302 | Length: | 2718 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016859592.1 | Gene: | RGPD1 / 400966 | HGNCID: | 32414 | Length: | 1805 | Species: | Homo sapiens |
Alignment Length: | 2352 | Identity: | 515/2352 - (21%) |
---|---|---|---|
Similarity: | 827/2352 - (35%) | Gaps: | 802/2352 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 GKLQP------------GRERDIKGLAVARLYMKVQEYPKAIEYLNGYLRVRD-DAVGHNMIATC 68
Fly 69 YSRLNPPDVTEALQHYQRSIQIDPRQSEVVIDACELLVKENNASITE-CARYWLDQANSLDLSGN 132
Fly 133 KQVFNLRMRVNLADSNGERDDTSGGDGEQNTLEILMYKELQARPQDVNIRIQLLRSYVEKMKIDQ 197
Fly 198 AF--------NYALKTELESKNCTSQSNEWYEQIWMVLFKIEMAKDVKKNWRFWHFALHT----- 249
Fly 250 LDRLVQLSLEGSGLADSSKQLFRLDQYLFKFSTSIERSGDAPQRDLHQACIDHFTGQLLLHAVTL 314
Fly 315 IFKREVLANKNKWMSTLRSALPLLLLGYQVRPIDDSSTNQWIKHCDAEQKQLIQMWRPQGAFRCA 379
Fly 380 QLGRTLLGCLDRSQMEIKNDRENAEFDENKNSGNSMPGLFADSEELLASAHQQCLDKSWRSQIYQ 444
Fly 445 QLFTHAEHKLKDTS---SHLVRNLRLQLPLFEWPNLAHIENYELQALVLPPHSLAQHVYLALGTD 506
Fly 507 PNKLGDAPRVVFYEGFQRDVKQNLNYCGQ----------DSISQVDVDLYL----YATTIQTRRK 557
Fly 558 LQIQREVYDSSNLGNRNAAARPHMMPFANLVGQLGAPEQSNWWDLVVRLNSNQLITEGNRAE--- 619
Fly 620 --------QRAQLQHGLEAVRGVNGPKADAIIIFQLGKILNSRSD-------------------- 656
Fly 657 ---RSSLEARIDTLYRQGFSILRHQHNQQMESYVRVFKYGSAGSTAAWQD-LQSLAEEAVTYFSE 717
Fly 718 KMFRIGQYEQFLDEVRGLHLPMAYFLQSEACHHLEESSKLPRTSRDRYSERRREC---LQKTQ-- 777
Fly 778 --KLIKNDD----------------KHPLIAAMHRHQQDRNSRGIDNSFGSPDVHNNSSAYEDAE 824
Fly 825 DDFYSHAAFSANR----SRRQLEVTPVTPIVMAQPSQEMEQAVKQISKSLCVLKDDVSVGMEAMR 885
Fly 886 QDIKVLTEKFTGLEDLLKKIKISSRDT-PTRDVDPAAALGLDDLFIIEDALAEHQQQQQHQQQQS 949
Fly 950 HNQGAIHPVVPNPYT-SGFYNGMPNTPSAQERFLQGPYGSPMFNQNQMYNYYAAQAQAQAQAQFL 1013
Fly 1014 RTPPAPGSIPPPNMFGPRNPNFGLPSMFPPPTVPSVAPYIDAMGNFTQPPPSLIPPPAQPAAPPA 1078
Fly 1079 PLNILESKPVVALPTPGFFNTTTPVFGASPIQVPQSKPLTVPTVPIPSTAPAPPIAGTVNPPATT 1143
Fly 1144 AVPPPVHIPQVAPSVPAQPPAPAPVSVPSMFNRALNNQPVEKEPPANVVITSSDPLPKPTTASVQ 1208
Fly 1209 PTLSVTIPAQHIKPSLVQAPEQPAQSAQPAQPSVSGVGSLSFNFGSKSSE-SPFS------FKTQ 1266
Fly 1267 VAKAAAEKQKEQEEAEQNQSGATDPNKTLPQDTSADDYDPRPDFKPIIPLPDEVEVRTGEEGEDI 1331
Fly 1332 KFTSRAKLFRYVDKE---WKERGTGVIKILCDKATGVSRVLMRRDQTHKVCANHTITADITINVA 1393
Fly 1394 NQDKDKKSLLWAANDFADEQVTLERFLVRFKTGELAEEFRVAFTK------------------AS 1440
Fly 1441 EAAKSKETVKPTVNTAEKGSTATAPAAFKSFVTS--------------TPAANSLINKPQEQTKT 1491
Fly 1492 QPNP------------DPPATAAKSLFGTLSVSAAPATSAPASATPFASFSFTPNGSSGFGTSTA 1544
Fly 1545 SPFGNLSFGTASAVGSGNNTTLFTTALIKDNTVQGKTLQQESQLNKSNSSDAEEEYVPTAQ-FVP 1608
Fly 1609 VIALPDIVEVVTGEENEDVLFEHRAKLLRWDKEANEWKERGLGNMKLLRDRTDPNKVRLLMRREQ 1673
Fly 1674 VHKLCCNQRLLPETKFTYATNCKAAVTWGAQDYSDEELTTALLAVRFKSQDICQQFLEAVQKAQQ 1738
Fly 1739 SIGNEPKKEEVPSAAGEKEKPIKGFGDAFKPKAGSWNCQACYTNNGQDQLYCLACQEPKDATVPP 1803
Fly 1804 KQSGLDQGNALNLTTSSSNKFSFGFASSATLPATGGFSFGGATQPKEKPAVAVVTASASAPTSVQ 1868
Fly 1869 TAALGFGKSSMTSGFGDAFKPAVGSWSCSACYVNNPGESLYCSACDAPK----NDTVPQ---KEK 1926
Fly 1927 SLGSGLNLPPTSKFSFGFGAAAAGDKDQAGDGATFNF---AAMPAAVAPTTSIGSSSFTFSMTKP 1988
Fly 1989 KPDQQQPNSTAAKEDEDNDSQ--------EVEEEENNTYFSPVIPLPDKIDVKTGEEDEELLYVH 2045
Fly 2046 KAKLYRLNESDWKERGLGDVKILRHRQTKKLRVVMRREQVFKIC--LNHVLNENVVYREKTETSW 2108
Fly 2109 MFAVHDFSEGESVLERFTLRFKNKEVAQGFMEAIKNALNE--TAKPIEDS----PVVGSVSQSTE 2167
Fly 2168 ANKPSQKNDGAA 2179 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup358 | NP_001247302.1 | TPR | <14..128 | CDD:223533 | 34/124 (27%) |
TPR repeat | 58..90 | CDD:276809 | 7/31 (23%) | ||
Atrophin-1 | <1030..1308 | CDD:331285 | 37/284 (13%) | ||
RanBD1_RanBP2_insect-like | 1324..1442 | CDD:269992 | 57/138 (41%) | ||
RanBD2_RanBP2_insect-like | 1620..1737 | CDD:269993 | 50/116 (43%) | ||
RanBP2-type Zn finger | 1774..1793 | CDD:275376 | 0/18 (0%) | ||
Nucleoporin_FG2 | 1806..>1986 | CDD:330420 | 32/189 (17%) | ||
RanBP2-type Zn finger | 1833..1861 | CDD:275375 | 4/27 (15%) | ||
zf-RanBP | 1891..1917 | CDD:279035 | 3/25 (12%) | ||
RanBP2-type Zn finger | 1894..1913 | CDD:275376 | 3/18 (17%) | ||
RanBD3_RanBP2_insect-like | 2034..2148 | CDD:269994 | 22/115 (19%) | ||
RanBD4_RanBP2_insect-like | 2571..2694 | CDD:269995 | |||
RGPD1 | XP_016859592.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 138 | 1.000 | Domainoid score | I4839 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 524 | 1.000 | Inparanoid score | I1253 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D111047at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000925 | |
OrthoInspector | 1 | 1.000 | - | - | otm40852 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104909 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3834 |
SonicParanoid | 1 | 1.000 | - | - | X2180 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.900 |