Sequence 1: | NP_001247302.1 | Gene: | Nup358 / 43041 | FlyBaseID: | FBgn0039302 | Length: | 2718 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021334470.1 | Gene: | ranbp2 / 100317326 | ZFINID: | ZDB-GENE-081104-93 | Length: | 2984 | Species: | Danio rerio |
Alignment Length: | 3346 | Identity: | 759/3346 - (22%) |
---|---|---|---|
Similarity: | 1184/3346 - (35%) | Gaps: | 1180/3346 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFTTRKEVDAHVHKMLGKLQPGRE-RDIKGLAVARLYMKVQEYPKAIEYLNGYLRVR-DDAVGHN 63
Fly 64 MIATCYSRLNPPDVTEALQHYQRSIQIDPRQSEVVIDACELLV---KENNASITECARYWLDQAN 125
Fly 126 SLDLSGNKQVFNLRMRVNLADSNGERDDTSGGDGEQNTLEILMYKELQARPQDVNIRIQLLRSYV 190
Fly 191 EKMKIDQAFNYALKTELESKNCTSQSNEWYEQIWMVL---FKIEMA-KDVKKNWRFWHFALHTLD 251
Fly 252 RLVQLSLEGSGLADSSKQLFRLDQYLFKFSTSIERSGDAPQRDLHQACIDHFTGQLLLHAVTLIF 316
Fly 317 KREVLANKNKWMSTLRSALPLLLLGYQVRPIDDSSTNQWIKHCDAEQKQLIQMWRPQGAF--RCA 379
Fly 380 QLGRTLLGCLDRSQMEIKNDRENAEFDENKNSGNSMPGLFADSEELLASAHQQCLDKSWRSQIYQ 444
Fly 445 QLFTHAEHK----LKD----TSSHLVRNLRLQLPLFEWPNLAHIENYELQALVLPPHSLAQHVYL 501
Fly 502 ALGTDPNKLGDA------------PRVVFYEGFQRDVKQNLNYCGQDSISQVDVDLYLYATTIQT 554
Fly 555 RRKLQIQREVYDSSNLGNRNAAARPHMMPFANLVGQLGAPEQSNWWDLVVRLNSNQLITEGNRAE 619
Fly 620 QRAQLQHGLEAVRGVN-------------------GPKADA----------------IIIFQLGK 649
Fly 650 ILNSRSDRSSLEARIDTLYRQGFSILRHQHNQQMESYVRVFKYGSAGSTAAWQDLQSLAEEAVTY 714
Fly 715 FSEKMFRIGQ-------YEQFLDEV-RGLH----------LPMAYFLQSEACHHLEESSKLPRTS 761
Fly 762 RDRYSERRRECLQKTQKLIKNDDKHPLIAAMHRHQQDRNSRGIDNSFGSPDVHNNSSAYEDAEDD 826
Fly 827 FYSHAAFSANRSRRQLEVTPVTPIVMAQPSQEMEQAVKQISKSLCVLKDDVSVGMEAMRQDIKVL 891
Fly 892 TEKFTGLEDLLKKIKISSRDTPTRDVDPAAALGLDDLFIIEDALAEHQQQQQHQQQQSHNQGAIH 956
Fly 957 PVVPNPYTSGF-----YNGMPNTPSAQERFLQGPYG----SPMFN-------------------- 992
Fly 993 ------QNQMYNYYAAQAQAQAQAQFLRTPPAPGSIPPPNMFGPRNPNFGLPSMFPPPTVPSVAP 1051
Fly 1052 YIDAMGNFTQPPPSLIPPPAQPAAPPAPLNILESKPVVALPTPGFFNTTTPVFGASPIQVPQSK- 1115
Fly 1116 -------PLTVPTVPIPSTAPAPPIAGTVNPPATTAVPPPVHIPQVAPSVPAQPPAPAPVSVPSM 1173
Fly 1174 FNRALNNQPVEKEPPANVVITSSDPLPKPTTASVQPTLSVTIPAQHIKPSLVQAPEQPAQSAQPA 1238
Fly 1239 QPSVSGVGS-----LSFNFGSKS------SESPFSFKTQVAK----AAAEKQKEQEEAEQNQSGA 1288
Fly 1289 TDPNKTLPQDTSADDYDPRPDFKPIIPLPDEVEVRTGEEGEDIKFTSRAKLFRY-VD-KEWKERG 1351
Fly 1352 TGVIKILCDKATGVSRVLMRRDQTHKVCANHTITADITINVANQDKDKKSLLWAANDFADEQVTL 1416
Fly 1417 ERFLVRFKTGELAEEFRVAFTKASE--------AAKSKETVKPTVNTAE---------------- 1457
Fly 1458 ------------------------KGSTA------------------------------------ 1462
Fly 1463 ---TAPAAFKSFVTSTPAANSLINKPQEQTKTQPNPDP---------PATAAKSL---------- 1505
Fly 1506 -----------FGTLSVSAAP--------ATSAPA------SATPFASFSFTPNGSSGFG----- 1540
Fly 1541 ----------------------------TSTASPFG----------------------------- 1548
Fly 1549 ----------------NLSFGTAS----AVGSGNNTTL-----FTTALIKDNTVQGKTLQQESQL 1588
Fly 1589 NKSNSS----------------------------------------------------------- 1594
Fly 1595 ----------------------------------------------------------------D 1595
Fly 1596 AEEEYVPT-----AQFVPVIALPDIVEVVTGEENEDVLFEHRAKLLRWDKEANEWKERGLGNMKL 1655
Fly 1656 LRDRTDPNKVRLLMRREQVHKLCCNQRLLPETKFTYATNCKAAVTWGAQDYSDEELTTALLAVRF 1720
Fly 1721 KSQDICQQFLEAVQKAQQSIGNEPKKEEVPSAAGEKEKPIKGFGDAFKPKAGSWNCQACYTNNGQ 1785
Fly 1786 DQLYCLACQEPKDATVPPKQSGLDQGNALNLTTSSSNKFSFGFASSATLPATGGFSFGGATQPKE 1850
Fly 1851 KPAVAVVTASASAPTSVQTAALGFGKSSMTSGFGDAF-KPAVGSWSCSACYVNNPGESLYCSACD 1914
Fly 1915 AP-KNDTVPQKEKSLGSGLNLPPTSKFSFGFGAAAAGDKDQAGDGATFNFAAMPAAVAPTTSIGS 1978
Fly 1979 SSFTFSMTKPKPDQQQPNSTAAKEDEDNDSQEVEEEENNTYFSPVIPLPDKIDVKTGEEDEELLY 2043
Fly 2044 VHKAKLYRLNE--SDWKERGLGDVKILRHRQTKKLRVVMRREQVFKICLNHVLNENVVYR--EKT 2104
Fly 2105 ETSWMFAVHDFSEGESVLERFTLRFKNKEVAQGFMEAIKNA------------------------ 2145
Fly 2146 ---------LNETAK-----------------PIE-DSPVVGSV---------SQSTEANKPSQK 2174
Fly 2175 NDGA------AKSRGGESEVLDVGKTSSVRPTTHEVIPPLPMTLPLLTLPQPLAKPN-------- 2225
Fly 2226 ---DYQTPATILFKGSSL---------------------SRNNSSASEASKTPSSAFIFGSTDKS 2266
Fly 2267 EPGKDAGPLANLQKLASGEGQGNVLGSIFRSGSSNENSSDGSVKFFFGGGNKAAEQQKKD----- 2326
Fly 2327 -------SSESVFGGNKADSQSPATQEAPKLAFGGIAAPVFGDANPFGGHKVNLQKSDGKEEPKS 2384
Fly 2385 IIGGTPLLFGGSNAFGIPKIETQSPAKDFVFGSAPAFGQMATFSFTAAKNEKEKDITSNNTTDLK 2449
Fly 2450 AEGKEKKELVPETTSTFADLAKTGSTFADLASN--PGGT-------------------------- 2486
Fly 2487 -FADLANKTGNDFA------NLSANSQGTTVGFNKSAGGGFYNLTHQNAFKNFESPQATEECDDD 2544
Fly 2545 GDATTDDNYDP-HYDAIVELPDEIVVTTGEENETKLFGERAKLYRYDAESKQWKERGVGEIKVLE 2608
Fly 2609 HPELQTFRLIMRQEQIHKLVLNMNISASLQMDYMNAQMKSFLWAGYNYAVDAEGKVDTEGVLERL 2673
Fly 2674 ACRFAKEEIASEF---LNTVNSCIKRAKALQ 2701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup358 | NP_001247302.1 | TPR | <14..128 | CDD:223533 | 32/118 (27%) |
TPR repeat | 58..90 | CDD:276809 | 7/31 (23%) | ||
Atrophin-1 | <1030..1308 | CDD:331285 | 64/300 (21%) | ||
RanBD1_RanBP2_insect-like | 1324..1442 | CDD:269992 | 62/127 (49%) | ||
RanBD2_RanBP2_insect-like | 1620..1737 | CDD:269993 | 45/116 (39%) | ||
RanBP2-type Zn finger | 1774..1793 | CDD:275376 | 2/18 (11%) | ||
Nucleoporin_FG2 | 1806..>1986 | CDD:330420 | 37/181 (20%) | ||
RanBP2-type Zn finger | 1833..1861 | CDD:275375 | 3/27 (11%) | ||
zf-RanBP | 1891..1917 | CDD:279035 | 4/26 (15%) | ||
RanBP2-type Zn finger | 1894..1913 | CDD:275376 | 1/18 (6%) | ||
RanBD3_RanBP2_insect-like | 2034..2148 | CDD:269994 | 52/150 (35%) | ||
RanBD4_RanBP2_insect-like | 2571..2694 | CDD:269995 | 49/125 (39%) | ||
ranbp2 | XP_021334470.1 | TPR_11 | 36..>182 | CDD:330823 | 48/165 (29%) |
TPR repeat | 59..89 | CDD:276809 | 7/31 (23%) | ||
TPR repeat | 94..123 | CDD:276809 | 9/33 (27%) | ||
Herpes_BLLF1 | <837..1115 | CDD:330317 | 78/360 (22%) | ||
PH-like | 1157..1273 | CDD:327399 | 61/117 (52%) | ||
zf-RanBP | 1308..1337 | CDD:279035 | 0/28 (0%) | ||
RanBP2-type Zn finger | 1312..1331 | CDD:275375 | 0/18 (0%) | ||
zf-RanBP | 1370..1399 | CDD:279035 | 5/29 (17%) | ||
RanBP2-type Zn finger | 1374..1393 | CDD:275375 | 2/18 (11%) | ||
RanBP2-type Zn finger | 1455..1474 | CDD:275375 | 3/18 (17%) | ||
zf-RanBP | 1505..1531 | CDD:279035 | 0/25 (0%) | ||
RanBP2-type Zn finger | 1509..1528 | CDD:275375 | 0/18 (0%) | ||
zf-RanBP | 1546..1575 | CDD:279035 | 0/28 (0%) | ||
RanBP2-type Zn finger | 1550..1569 | CDD:275375 | 0/18 (0%) | ||
RanBD2_RanBP2-like | 1798..1914 | CDD:269998 | 45/116 (39%) | ||
PH-like | 2088..2204 | CDD:327399 | 50/115 (43%) | ||
IR1-M | 2381..2440 | CDD:314969 | 10/72 (14%) | ||
IR1-M | 2442..>2488 | CDD:314969 | 7/45 (16%) | ||
Epiglycanin_TR | 2530..2596 | CDD:310328 | 18/66 (27%) | ||
PH-like | 2685..2801 | CDD:327399 | 49/122 (40%) | ||
cyclophilin | 2824..2982 | CDD:320812 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 145 | 1.000 | Domainoid score | I4516 |
eggNOG | 1 | 0.900 | - | - | E1_COG5171 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 452 | 1.000 | Inparanoid score | I1582 |
OMA | 1 | 1.010 | - | - | QHG46755 | |
OrthoDB | 1 | 1.010 | - | - | D111047at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000925 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_104909 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23138 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2180 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.880 |