DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup37 and Nup37

DIOPT Version :10

Sequence 1:NP_651360.1 Gene:Nup37 / 43040 FlyBaseID:FBgn0039301 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_081467.2 Gene:Nup37 / 69736 MGIID:1919964 Length:326 Species:Mus musculus


Alignment Length:300 Identity:98/300 - (32%)
Similarity:156/300 - (52%) Gaps:17/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NLIAVAFRKHLSLLLVGLPEESGE---FGYTRLQDMDLGEKEQRSVSALAFSPDTSLNCTPNNVT 91
            ||||.....::.:.:....||..:   ..|..|:....|.:    |..:|:||:|.|:..|..:.
Mouse    34 NLIAYGGSNYVVVGMCTFQEEETDIEGIQYKTLRTFHHGVR----VDGIAWSPETKLDSLPPVIK 94

  Fly    92 LC-AANGSQLKLYRTDLGQFTSLQVLRGHGDYVND-VSWVCDGELLASVSDDFTCRFWTTTGGGE 154
            .| :|...:::|:.:||......:||.||.|::|| |....:|:.|||||||.|||.|...  |:
Mouse    95 FCTSAADLKIRLFTSDLQDKNEYKVLEGHSDFINDLVFHPKEGQELASVSDDHTCRIWNLE--GK 157

  Fly   155 NVITFGLSSAGMSVKSHPEDPNKVLVAEKKGIIHLYNVTLKQTVISVESPKFPLMSADWAHSNRL 219
            ....|.|.|.||||..|||:..|::||||.|.|..|::..:|.::|::|.:.|||||.|...|..
Mouse   158 QTAHFLLHSPGMSVCWHPEETFKLMVAEKNGTIRFYDLMAQQAILSLQSEQTPLMSAHWCLKNTF 222

  Fly   220 FITSLAGGDVVTWDLNRPYVPADVKQVHEDCGRVVRFAPGSSEMVIAMV-----IGLTLKVFAAK 279
            .:.::||.|.:.||:.|...|.:.:.||.|...:.|:: ..||.:.|..     :....::....
Mouse   223 KVGAVAGNDWIIWDITRSSYPQETRPVHMDRAHLFRWS-AISENLFATTGYPGKMASQFQIHHLG 286

  Fly   280 STVPLLEASLKSYGGMAWHQRLPYISAVSDRKLLFWKVQM 319
            .:.|:|..|:....|::||:.||..:...|.|||||..::
Mouse   287 HSQPVLIGSVAVGSGLSWHRTLPLCAVGGDHKLLFWVTEI 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup37NP_651360.1 WD40 <69..318 CDD:441893 89/255 (35%)
WD40 repeat 72..118 CDD:293791 14/46 (30%)
WD40 repeat 124..160 CDD:293791 16/36 (44%)
WD40 repeat 165..202 CDD:293791 17/36 (47%)
WD40 repeat 209..245 CDD:293791 12/35 (34%)
WD40 repeat 252..286 CDD:293791 5/38 (13%)
Nup37NP_081467.2 WD40 repeat 22..70 CDD:293791 8/38 (21%)
WD40 <64..260 CDD:475233 72/197 (37%)
WD 1 70..117 12/47 (26%)
WD40 repeat 76..122 CDD:293791 14/46 (30%)
WD 2 122..162 19/40 (48%)
WD40 repeat 127..163 CDD:293791 16/36 (44%)
WD 3 164..203 18/38 (47%)
WD40 repeat 170..205 CDD:293791 15/34 (44%)
WD40 repeat 211..248 CDD:293791 14/36 (39%)
WD40 repeat 291..322 CDD:293791 12/30 (40%)
WD 4 294..325 11/29 (38%)

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