DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup37 and nup37

DIOPT Version :10

Sequence 1:NP_651360.1 Gene:Nup37 / 43040 FlyBaseID:FBgn0039301 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001002619.1 Gene:nup37 / 436892 ZFINID:ZDB-GENE-040718-363 Length:326 Species:Danio rerio


Alignment Length:336 Identity:101/336 - (30%)
Similarity:164/336 - (48%) Gaps:34/336 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PDHSIQLNEAIYCYDICTNDFAY-------------NLIAVAFRKHLSLLLVGLPEESGE---FG 55
            ||.:::    ...|.:...|:.:             :|:|....|::.:......||..|   ..
Zfish     2 PDDTVR----SATYTVPCEDYVHVVEFSPYDCGSPASLLAYGGNKYVVVGTCRFKEEDAEVEGVE 62

  Fly    56 YTRLQDMDLGEKEQRSVSALAFSPDTSLNCTPNNVTL-CAANGSQLKLYRTDLGQFTSLQVLRGH 119
            :..||....|.:    |.|:|:||:|.|:..|..:.. .||...:::|:.:||.....::|:.||
Zfish    63 FNSLQVFMHGVR----VDAIAWSPETHLDKLPPVIRFSTAAADRKIRLWTSDLQNSCDVKVMEGH 123

  Fly   120 GDYVNDVSW-VCDGELLASVSDDFTCRFWTTTGGGENVITFGLSSAGMSVKSHPEDPNKVLVAEK 183
            ..|:|.:.: ..:|:.:||||||.|||.|..  .|....:|.|.|.|:||..||||..|::||||
Zfish   124 TSYINHLVFEPAEGKQIASVSDDHTCRVWDL--DGNETTSFRLRSPGVSVCWHPEDNCKLMVAEK 186

  Fly   184 KGIIHLYNVTLKQTVISVESPKFPLMSADWAHSNRLFITSLAGGDVVTWDLNRPYVPADVKQVHE 248
            ||.|..|::..:..::|::|.:.|||||||..:|.:.:.::...|.|.||:.|...|.:.:..|.
Zfish   187 KGTIRFYDLVTQHAILSLDSGQVPLMSADWCLTNTIKVGAVVANDWVIWDITRSSYPLEKRPAHV 251

  Fly   249 DCGRVVRFAPGSSEMVIAMV-----IGLTLKVFAAKSTVPLLEASLKSYGGMAWHQRLPYISAVS 308
            |..|..|:: .::|.:.|..     |...|.|.......|::..|.....|::||:.||......
Zfish   252 DKARHFRWS-RANENLFATTGYPGKINSQLLVHHLGHPQPVMLGSASVGAGLSWHRTLPLCVIGG 315

  Fly   309 DRKLLFWKVQM 319
            ||||.||..:|
Zfish   316 DRKLFFWMTEM 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup37NP_651360.1 WD40 <69..318 CDD:441893 87/255 (34%)
WD40 repeat 72..118 CDD:293791 14/46 (30%)
WD40 repeat 124..160 CDD:293791 13/36 (36%)
WD40 repeat 165..202 CDD:293791 17/36 (47%)
WD40 repeat 209..245 CDD:293791 12/35 (34%)
WD40 repeat 252..286 CDD:293791 8/38 (21%)
nup37NP_001002619.1 WD40 repeat 20..59 CDD:293791 6/38 (16%)
WD40 <71..291 CDD:441893 75/226 (33%)
WD40 repeat 77..122 CDD:293791 13/44 (30%)
WD40 repeat 128..164 CDD:293791 14/37 (38%)
WD40 repeat 168..205 CDD:293791 17/36 (47%)
WD40 repeat 212..241 CDD:293791 11/28 (39%)

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