DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27 and Rps27

DIOPT Version :9

Sequence 1:NP_001247301.1 Gene:RpS27 / 43039 FlyBaseID:FBgn0039300 Length:84 Species:Drosophila melanogaster
Sequence 2:NP_446049.1 Gene:Rps27 / 94266 RGDID:621045 Length:84 Species:Rattus norvegicus


Alignment Length:82 Identity:70/82 - (85%)
Similarity:76/82 - (92%) Gaps:0/82 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATILCQ 65
            ||||||||||.|.|||||||.|||||.||||||||||||||:|||||||||.||:|.||:|:|||
  Rat     1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 65

  Fly    66 PTGGRAKLTEGCSFRRK 82
            ||||:|:||||||||||
  Rat    66 PTGGKARLTEGCSFRRK 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27NP_001247301.1 PTZ00083 6..83 CDD:185434 65/77 (84%)
Rps27NP_446049.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 18/21 (86%)
PLN00209 6..82 CDD:165774 63/75 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 112 1.000 Domainoid score I6049
eggNOG 1 0.900 - - E1_COG2051
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H803
Inparanoid 1 1.050 157 1.000 Inparanoid score I4184
OMA 1 1.010 - - QHG53676
OrthoDB 1 1.010 - - D1537724at2759
OrthoFinder 1 1.000 - - FOG0001154
OrthoInspector 1 1.000 - - otm63539
orthoMCL 1 0.900 - - OOG6_100584
Panther 1 1.100 - - O PTHR11594
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X705
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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