DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sil1 and RPL10

DIOPT Version :10

Sequence 1:NP_651356.1 Gene:Sil1 / 43034 FlyBaseID:FBgn0039296 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_013176.1 Gene:RPL10 / 850764 SGDID:S000004065 Length:221 Species:Saccharomyces cerevisiae


Alignment Length:72 Identity:18/72 - (25%)
Similarity:26/72 - (36%) Gaps:21/72 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HV-RINLQTGLKEAKLLDESERGTSLQSQPDDQNAR----------ESHDDNEPLALDYKPDIIE 107
            || |||.......|..|.:..||.  ..:|....||          .:.|.|:        |::.
Yeast    95 HVLRINKMLSCAGADRLQQGMRGA--WGKPHGLAARVDIGQIIFSVRTKDSNK--------DVVV 149

  Fly   108 ESIRRVK 114
            |.:||.:
Yeast   150 EGLRRAR 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sil1NP_651356.1 SIL1 167..>326 CDD:407047
RPL10NP_013176.1 PTZ00173 1..206 CDD:185498 18/72 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.