DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sil1 and Hspbp1

DIOPT Version :9

Sequence 1:NP_651356.1 Gene:Sil1 / 43034 FlyBaseID:FBgn0039296 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001347558.1 Gene:Hspbp1 / 66245 MGIID:1913495 Length:357 Species:Mus musculus


Alignment Length:338 Identity:71/338 - (21%)
Similarity:128/338 - (37%) Gaps:52/338 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 EPLALDYKPDIIEESIRRVKEQKKSYAELRKAYKEFQKNFRTDGELIVQLIDQFRNFSR-TP--- 155
            ||   |..|:.:.|..|:..::..|.|            ||...|.:.|:.:..|..|: ||   
Mouse    57 EP---DPPPEPMSEERRQWLQEAMSAA------------FRGQREEVEQMKNCLRVLSQATPAMA 106

  Fly   156 ----LESEMRSKLDCLENLEYLLHQIDNALMFIDNGGLDDVLLPIVVNDTSTSLRVSAMRVLGSL 216
                |.::.:.:...||.|..|...:|||..|....|: .:|:...:...:..||..|.:::|:.
Mouse   107 GEAELATDQQEREGALELLADLCENMDNAADFCQLSGM-HLLVGRYLEAGAAGLRWRAAQLIGTC 170

  Fly   217 ASNNPKAQIKVFEKNFGSHLAQILTSSGNVGEISAALHAFGALLRKFPLAQQRVLSTSGTQALIK 281
            :.|....|.:|........|.::|...........||.|...|:|:......:.|...|...|::
Mouse   171 SQNVAAIQEQVLGLGALRKLLRLLDRDSCDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMR 235

  Fly   282 VLQSPDVELRSKAKVVTLISDLVLEKRSVLDVSKDDPEASSTMAQYVLLDFESWLKTPGYCAAVD 346
            .:|....:|  |.|...|:.:|::          ..||...|:....::.....|....:....:
Mouse   236 AMQQQVQKL--KVKSAFLLQNLLV----------GHPEHKGTLCSMGMVQQLVALVRTEHSPFHE 288

  Fly   347 TVLTKEFLLLLEQPEVVEQFATALETTEDMCTSTWSQSSGLRHALLTVRNRYANSTDEYRLEVSQ 411
            .||.....|:.:.|:.|.:........|::          |||....::.|     :||:.|: :
Mouse   289 HVLGALCSLVTDFPQGVRECREPELGLEEL----------LRHRCQLLQQR-----EEYQEEL-E 337

  Fly   412 ILAKLCERLFNKP 424
            ...||.:..|:.|
Mouse   338 FCEKLLQTCFSSP 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sil1NP_651356.1 SIL1 167..>326 CDD:374797 36/158 (23%)
Hspbp1NP_001347558.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 4/13 (31%)
Fes1 43..137 CDD:369996 24/94 (26%)
ARM 1 130..172 10/42 (24%)
armadillo repeat 135..172 CDD:293788 8/37 (22%)
ARM 2 175..215 8/39 (21%)
armadillo repeat 178..213 CDD:293788 7/34 (21%)
ARM 3 218..257 9/40 (23%)
armadillo repeat 231..255 CDD:293788 6/25 (24%)
ARM 4 260..299 7/38 (18%)
armadillo repeat 263..299 CDD:293788 5/35 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R442
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.