DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sil1 and sil1

DIOPT Version :9

Sequence 1:NP_651356.1 Gene:Sil1 / 43034 FlyBaseID:FBgn0039296 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_009289496.2 Gene:sil1 / 568308 ZFINID:ZDB-GENE-160113-49 Length:463 Species:Danio rerio


Alignment Length:408 Identity:120/408 - (29%)
Similarity:191/408 - (46%) Gaps:63/408 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ATETDNKTND------FVATDEWQTIAEGQAIPRGLHVRINLQTGLKEAKLLDESERGTSLQSQP 82
            |.||..:..|      |..||:|||:..|||:|.|.|||:|||||.:|.|:  ..|.|.......
Zfish    52 AEETHLEDEDPEDLEVFRPTDKWQTLRPGQAVPAGSHVRLNLQTGQREVKM--GEEEGFKYWKDG 114

  Fly    83 DDQNA--RESHDDNEPLALDYKPDIIEESIRRVK-------EQKKSYA---------ELRKAYKE 129
            :.|..  .:||        .:..:.:::::::.|       :|::..|         ||:|..:.
Zfish   115 NRQGMMNMDSH--------SFTAEELKKALKKFKKGADDPVDQQEEDAVRAKFWPMDELKKDMEA 171

  Fly   130 FQKNFRTDGELIVQLIDQFRNFSRTPLESEMRSKLDCLENLEYLLHQIDNALMFIDNGGLDDVLL 194
            ......||.:::.:|:|||.|.:.|..|     |:..|.:||||:||:|||...:..||:..|:.
Zfish   172 LDMLVETDIQVMRRLLDQFNNTNSTTEE-----KVAALLDLEYLVHQVDNAQNLVSMGGMSLVIR 231

  Fly   195 PIVVNDTSTSLRVSAMRVLGSLASNNPKAQIKVFEKNFGSHLAQILTSSGNVGEISA---ALHAF 256
            .:  |.|...|:..|..||||..|:||..|::..|   |..|.::||.......::.   .|.|.
Zfish   232 SL--NSTDVRLQECAAFVLGSAVSSNPSVQVEAVE---GGALQKLLTLLATQRPMTVKKKVLFAV 291

  Fly   257 GALLRKFPLAQQRVLSTSGTQALIKVLQSPDVELRSKAKVVTLISDLVLEKRSVLDVSKD---DP 318
            .:|||.||.||...|...|.|.|.::.|:|..| ..:.:::|::.|:::||..:..|..|   |.
Zfish   292 ASLLRHFPFAQSHFLKLGGVQVLSELFQTPGAE-AMRVRIITVLYDMIIEKELISQVGLDIIPDS 355

  Fly   319 EASSTMAQYVLLDFESWLKTPGYCAAVDTVLTKEFLLLLEQPEVVEQFATALETTEDM---CTST 380
            .....:.||..:.....|...|:|..|..        |||.|| .:....||.|...|   |.:.
Zfish   356 SHQERLRQYAEVSLLPVLVEQGWCRLVPE--------LLESPE-HDWREKALRTLLAMMAQCQTQ 411

  Fly   381 WSQSSGLRHALLTVRNRY 398
            :.|::||..:|..::.:|
Zfish   412 FKQNAGLTASLSELQKQY 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sil1NP_651356.1 SIL1 167..>326 CDD:374797 53/164 (32%)
sil1XP_009289496.2 Fes1 <168..220 CDD:312204 20/56 (36%)
armadillo repeat 180..207 CDD:293788 9/31 (29%)
armadillo repeat 217..254 CDD:293788 12/38 (32%)
armadillo repeat 260..296 CDD:293788 8/38 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581684
Domainoid 1 1.000 77 1.000 Domainoid score I8794
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H32544
Inparanoid 1 1.050 146 1.000 Inparanoid score I4396
OMA 1 1.010 - - QHG48752
OrthoDB 1 1.010 - - D1501690at2759
OrthoFinder 1 1.000 - - FOG0005609
OrthoInspector 1 1.000 - - otm26042
orthoMCL 1 0.900 - - OOG6_103989
Panther 1 1.100 - - LDO PTHR19316
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5248
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

Return to query results.
Submit another query.