DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sil1 and mRpL16

DIOPT Version :9

Sequence 1:NP_651356.1 Gene:Sil1 / 43034 FlyBaseID:FBgn0039296 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001259148.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster


Alignment Length:107 Identity:22/107 - (20%)
Similarity:36/107 - (33%) Gaps:40/107 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 TPLES-----EMRSKLDCLENLEYLLHQIDNALMF----IDNGGLDDVLLPIVVNDTSTSLRVSA 209
            ||:::     |:..|.:.:| ::..|.|:.|.|.|    :....||:   ..|..:..|.     
  Fly   153 TPIKAGRVIVEIAGKCEFVE-VKQFLQQVANQLPFQATVVSQEMLDE---QRVAEEEQTR----- 208

  Fly   210 MRVLGSLASNNPKAQIKVFEKN---------------FGSHL 236
                   .:.||.....|.:.|               ||.||
  Fly   209 -------QNENPFTMKYVIQNNLSGCHRWLSPVDHKWFGKHL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sil1NP_651356.1 SIL1 167..>326 CDD:374797 18/89 (20%)
mRpL16NP_001259148.1 Ribosomal_L16 64..184 CDD:278672 8/31 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0197
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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