DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sil1 and Hspbp1

DIOPT Version :10

Sequence 1:NP_651356.1 Gene:Sil1 / 43034 FlyBaseID:FBgn0039296 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_640354.1 Gene:Hspbp1 / 246146 RGDID:628677 Length:357 Species:Rattus norvegicus


Alignment Length:408 Identity:82/408 - (20%)
Similarity:141/408 - (34%) Gaps:115/408 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AEGQAIPRGLHVRINLQTGLKEAKLLDESERGTSLQSQPDDQNARESHDDNEPLALDYKPDIIEE 108
            |.|...||   :..||| ||.:..:...||                     ||   |..|:.:.|
  Rat    31 AGGSGNPR---LPRNLQ-GLLQMAITAGSE---------------------EP---DPPPEPMSE 67

  Fly   109 SIRRVKEQKKSYAELRKAYKEFQKNFRTDGELIVQLIDQFRNFSR-TP-------LESEMRSKLD 165
            ..|:..::..|.|            ||...|.:.|:.:..|..|: ||       |.::.:.:..
  Rat    68 ERRQWLQEAMSAA------------FRGQREEVEQMKNCLRVLSQATPPTAGEAELATDQQEREG 120

  Fly   166 CLENLEYLLHQIDNALMFIDNGGLDDVLLPIVVNDTSTSLRVSAMRVLGSLASNNPKAQIKVFEK 230
            .||.|..|...:|||..|....|: .:|:...:...:..||..|.:::|:.:.|....|.:|...
  Rat   121 ALELLADLCENMDNAADFCQLSGM-HLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGL 184

  Fly   231 NFGSHLAQIL-TSSGNVGEISAALHAFGALLRKFPLAQQRVLSTSGTQALIKVLQSPDVELRSKA 294
            .....|.::| ..|.:...:: ||.|...|:|:......:.|...|...|::.:|....:|  |.
  Rat   185 GALRKLLRLLDRDSCDTVRVN-ALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKL--KV 246

  Fly   295 KVVTLISDLVLEKRSVLDVSKDDPEASSTMAQYVLLDFESWLKTPGYCAAVDTVLTKEFLLLLEQ 359
            |...|:.:|::          ..||...|:                 |:.               
  Rat   247 KSAFLLQNLLV----------GHPEHKGTL-----------------CSM--------------- 269

  Fly   360 PEVVEQFATALETTED---------MCTSTWSQSSGLRHA---------LLTVRNRYANSTDEYR 406
             .:|:|....:.|...         :|:.......|:|..         ||..|.:.....:||:
  Rat   270 -GMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHRCQLLQQHEEYQ 333

  Fly   407 LEVSQILAKLCERLFNKP 424
            .|: :...||.:..|:.|
  Rat   334 EEL-EFCEKLLQTCFSSP 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sil1NP_651356.1 SIL1 167..>326 CDD:407047 37/159 (23%)
Hspbp1NP_640354.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 16/65 (25%)
Fes1 43..137 CDD:462534 30/130 (23%)
ARM 1 130..172 10/42 (24%)
armadillo repeat 135..172 CDD:293788 8/37 (22%)
ARM 2 175..215 9/40 (23%)
armadillo repeat 178..213 CDD:293788 8/35 (23%)
ARM 3 218..257 9/40 (23%)
armadillo repeat 231..255 CDD:293788 6/25 (24%)
ARM 4 260..299 8/71 (11%)
armadillo repeat 263..299 CDD:293788 6/68 (9%)

Return to query results.
Submit another query.