Protein Alignment Cad96Cb and pcdh10

DIOPT Version :9

• Sequence 1: NP_001287524.1
• Gene: Cad96Cb / 43033
• FlyBaseID: FBgn0039294
• Length: 789
• Species: Drosophila melanogaster
• Sequence 2: XP_012820790.1
• Gene: pcdh10 / 779938
• XenbaseID: XB-GENE-5866461
• Length: 1010
• Species: Xenopus tropicalis
• Alignment Length: 981
• Identity: 206/981 - (20%)
• Similarity: 344/981 - (35%)
• Gaps: 288/981 - (29%)

  Fly    15 LCWFNKATLGAILDSRCYLEGGGSAESFLATEDLAVGSIIGKLRINGDANAETGDINLSLRE-KN 78
            :.||        |...|..||..:..::...|:...|:.:|.:       ||  |:.|.:.: .|
 Frog     1 MLWF--------LLLLCAAEGLLAQLAYKVQEERDHGTFVGNI-------AE--DLGLDITKLSN 48

  Fly    79 APVEIHPGTKELALSVELDKEGVRGPSSIYVN------VICIRRHS---------TDPSFVIPVN 128
            ...:..|.::...|.:.|: .||     :|||      .||.:..|         .:|.....|.
 Frog    49 RRFQTAPNSRTPYLELNLE-NGV-----LYVNEKIDREQICKQNPSCMLHLEVFLENPLEFFRVE 107

  Fly   129 VRVTDVNDNAPQWIGTPYTLTLSEVTVPGTRI-LQGARAEDADQPGPFSTVEYQVLPGPY----- 187
            :.|.|:|||.|.:..:...:.:||...||||. |:.|...|.   |..|...|::....|
 Frog   108 IEVLDINDNPPVFPQSDIQVEISESATPGTRFPLESAYDLDV---GNNSLRTYEITTNSYFNLDV 169

  Fly   188 ------SEYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQN 246
                  :::.:        |||||.||.||.......|.|.|.|||.|....||.:.:.|::|..
 Frog   170 QTQGDGNKFAE--------LVLKKQLDREQQALHRYVLTAIDGGTPQRTGTALLTIKVLDSNDNV 226

  Fly   247 PKFQRESYSAEIPADGRPGELRMRPEPLKAVDQDEGICAPIQYTIVQSQDAK---YFRIHPHNGA 308
            |.|:::.|:..:|.:..||.:.::   |.|.|||||....:.|:.......|   .|.|.|..|.
 Frog   227 PVFEQQIYTVSLPENSPPGTMVIQ---LNATDQDEGQNGEVVYSFSSHNSPKVRDIFGIDPRTGR 288

  Fly   309 ISLLTPIGYAD-----------------VANGATLVVKATQI-DNPDRYALTTV-----QLTRPG 350
            |.::..:.|.|                 |.....::||...: |||...:.:||     :...||
 Frog   289 IEIIGELDYEDSGSYQVYVQAKDLGPNAVPVHCKVLVKVLDLNDNPPEISFSTVKESVSESASPG 353

  Fly   351 S------------------HSDL-----STLAFVQKRFVMRIREDT------------------- 373
            :                  |.::     ..|....|.:...:.|.|
 Frog   354 TVVALFSVTDRDSEENGQIHCEILGDVPFRLKLSYKNYYTIVTEGTLDREAMATYTVTVLARDRG 418

  Fly   374 --------------------------AVGNRILALPTNKPGKHLK-----------------YVI 395
                                      |:.| :..:..|.||.::.                 |::
 Frog   419 TPPLSSTKSIQVQVADVNDNSPRFTQAIYN-VYVIENNVPGAYISAVSATDKDEEENANISYYIL 482

  Fly   396 PDPVNSQ----FFSVGS-LGELVLAKPLDYEKMTKHEFQVLATDGMT---NSTAELTLEVIDVND 452
            ...:...    :.|:.| .|.|...:..|||::....|.|.|.||.|   :|.|.:.:.::|.||
 Frog   483 ECDIQGMSVFTYVSINSENGYLYALRTFDYEQLKDFSFMVEARDGGTPPLSSNATVNIIIVDQND 547

  Fly   453 WEPRFRETHYEFMVPKSSLQSRADSFEGVLIGKVEAADGDRNDKLELS---LRGQHAGLFEIDST 514
            ..|............|..|...|:  .|.|..:|.|.|.|..:...|:   |||....||.:|
 Frog   548 NAPAIVSPQGRNGTAKEFLPRTAE--PGYLFTRVVAVDSDEGENARLTYSILRGNDMSLFRMD-- 608

  Fly   515 GNIYMRPEQLQSLNEST--------VHLIAIATDTGVPPRSTSVPVSVTMEGLTLARSGWNSN-- 569
                .|..:|::..:.|        ..|:....|.|.||.|::..:.|.:...::.|.|....
 Frog   609 ----WRTGELRTARKITNKRDPHRPFELVVEVRDHGQPPLSSTALIQVQIVDSSVERQGGEQRPS 669

  Fly   570 ------------MLGMFGMIMGLFLMIIVALSCYIVRSKKQGK----------------SASSGL 606
                        ::...|.:..:||:.::.|:   :|.:|:.|                |..|..
 Frog   670 RSSDTALDLTLILIIALGSVSFIFLLAMIVLA---IRCQKEKKLNIYSCLASDCCMCCCSCCSRQ 731

  Fly   607 GLGRNRVHSQA------HSSVSSANLVTHEKLAGNG----NGNGA-----SVTSGGVSVLHMKHG 656
            ...|.:..|::      .|:|.||..|..|..:..|    |.|..     :..|....::.:|..
 Frog   732 ARARKKKLSKSDIMLVQSSNVPSATQVPVEDSSSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPC 796

  Fly   657 GNITMANPMNNGLHHVASGASSSMA-LGSSAALLERERERER------DRERQRESYA---ATVR 711
            ......:..:|....:.:|.|.... :.|:.::|..|.::..      ||.|:..|.|   |.:
 Frog   797 SPSRSTDTEHNPCGAIVTGYSDQQPDIISNGSILSSENKQRTELSYLVDRPRRVNSSAFQEADI- 860

  Fly   712 IFLPGIVSRASANGQLFEEDEIEHDSLQTENNNRKVAATGVASGGVTTISTTPANAGSNLLSATD 776
                 :.|:.|.:|. .|:.:.:||:     .||     |.:||         .:..||......
 Frog   861 -----VSSKDSGHGD-SEQGDSDHDA-----TNR-----GQSSG---------TDLFSNCTEECK 900

  Fly   777 AMGSSE 782
            |:|.|:
 Frog   901 ALGHSD 906

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cad96Cb	NP_001287524.1	Cadherin_repeat	46..137	CDD:206637	24/106 (23%)
		Cadherin_repeat	145..244	CDD:206637	32/110 (29%)
		Cadherin_repeat	253..347	CDD:206637	28/119 (24%)
		Cadherin_repeat	365..452	CDD:206637	24/156 (15%)
		Cadherin_repeat	461..555	CDD:206637	25/104 (24%)
pcdh10	XP_012820790.1	Cadherin_2	17..98	CDD:369785	19/95 (20%)
		Cadherin_repeat	125..225	CDD:206637	32/110 (29%)
		Cadherin_repeat	233..333	CDD:206637	23/102 (23%)
		Cadherin_repeat	345..438	CDD:206637	7/92 (8%)
		Cadherin_repeat	446..548	CDD:206637	22/102 (22%)
		Cadherin_repeat	566..656	CDD:206637	25/97 (26%)
		Cadherin_C_2	677..794	CDD:374575	21/119 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	119	1.000	Inparanoid score	I4624
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050