DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Cb and PCDHA10

DIOPT Version :9

Sequence 1:NP_001287524.1 Gene:Cad96Cb / 43033 FlyBaseID:FBgn0039294 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_061724.1 Gene:PCDHA10 / 56139 HGNCID:8664 Length:948 Species:Homo sapiens


Alignment Length:628 Identity:157/628 - (25%)
Similarity:266/628 - (42%) Gaps:106/628 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EGGGSAESFLATEDLAVGSIIGKLRINGDANAETGDI-----NLSLREKNAPVEIHPGTKELALS 93
            |.|.....:...|:...|:.:|  ||..|...|..::     .::.:.....:|::.....|.::
Human    24 EVGSGQLHYSVYEEARHGTFVG--RIAQDLGLELAELVQRLFRVASKRHGDLLEVNLQNGILFVN 86

  Fly    94 VELDKEGVRGPS---SIYVNVICIRRHSTDPSFVIPVNVRVTDVNDNAPQWIGTPYTLTLSEVTV 155
            ..:|:|.:.|.|   ||::.||..|     |..|..|:|.|.|:|||.|:     :::|..::::
Human    87 SRIDREELCGRSVECSIHLEVIVDR-----PLQVFHVDVEVKDINDNPPR-----FSVTEQKLSI 141

  Fly   156 PGTRILQG----ARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLE----GTLVLKKALDYEQL 212
            |.:|:|..    ..|.||| .|..:.:.|::.|..|. .:..:|..:    ..|||:|.||.|:.
Human   142 PESRLLDSRFPLEGASDAD-VGENALLTYKLSPNEYF-VLDIINKKDKDKFPVLVLRKLLDREEN 204

  Fly   213 QNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQNPKFQRESYSAEIPADGRPGELRMRPEPLKAV 277
            ....:.|.|.|.|.|.......|.:::.||:|..|.|.|..|..::..:.....|.:|   |.|.
Human   205 PQLKLLLTATDGGKPEFTGSVSLLILVLDANDNAPIFDRPVYEVKMYENQVNQTLVIR---LNAS 266

  Fly   278 DQDEGICAPIQY---TIVQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRY 339
            |.||||...:.|   ::|.....:.|.|:...|.|.:...|.:.| :|...:.|..|...||...
Human   267 DSDEGINKEMMYSFSSLVPPTIRRKFWINERTGEIKVNDAIDFED-SNTYEIHVDVTDKGNPPMV 330

  Fly   340 ALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTAVGN--RILALPTNKPG----------KHLK 392
            ...|| |......:|.|....|.. ..:.::||..||.  .::::..:..|          .|:.
Human   331 GHCTV-LVELLDENDNSPEVIVTS-LSLPVKEDAQVGTVIALISVSDHDSGANGQVTCSLTPHVP 393

  Fly   393 YVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTN---STAELTLEVIDVNDWE 454
            :.:.....:.:       .|||...||.|:::.:|..|.|.||.:.   :||.:::||.||||..
Human   394 FKLVSTYKNYY-------SLVLDSALDRERVSAYELVVTARDGGSPPLWATASVSVEVADVNDNA 451

  Fly   455 PRFRETHYEFMVPKSSLQS---------RADSFEGVLI--GKVEAADGDRNDKLELSLRGQHAGL 508
            |.|.::.|...|.:::...         .||:.|..|:  ..||...|:|:....:|:   ||  
Human   452 PAFAQSEYTVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRLGERSLSSYVSV---HA-- 511

  Fly   509 FEIDSTGNIYMRPEQLQSLNESTVHLIAI---ATDTGVPPRSTSVPVSVTMEGLTLARSGWNSNM 570
                .:|.:|    .||.|:...:.|:..   |.|.||||..:    ::|::...|..   |.|.
Human   512 ----ESGKVY----ALQPLDHEELELLQFQVSARDGGVPPLGS----NLTLQVFVLDE---NDNA 561

  Fly   571 LGMF--------GMIMGLFLMIIVALSCYIVRSKKQGKSASSG 605
            ..:.        |.:..|.|..:||  .::| :|.:...|.||
Human   562 PALLASPAGSAGGAVSELVLRSVVA--GHVV-AKVRAVDADSG 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CbNP_001287524.1 Cadherin_repeat 46..137 CDD:206637 25/98 (26%)
Cadherin_repeat 145..244 CDD:206637 28/106 (26%)
Cadherin_repeat 253..347 CDD:206637 25/96 (26%)
Cadherin_repeat 365..452 CDD:206637 23/101 (23%)
Cadherin_repeat 461..555 CDD:206637 25/107 (23%)
PCDHA10NP_061724.1 Cadherin_2 29..110 CDD:285466 17/82 (21%)
Cadherin_repeat 136..237 CDD:206637 27/102 (26%)
Cadherin_repeat 245..345 CDD:206637 26/104 (25%)
Cadherin_repeat 353..450 CDD:206637 24/104 (23%)
Cadherin_repeat 458..560 CDD:206637 28/121 (23%)
Cadherin_repeat 580..669 CDD:206637 8/25 (32%)
6 X 4 AA repeats of P-X-X-P 732..892
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 783..804
Cadherin_tail 797..940 CDD:292596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 827..948
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4632
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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