DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Cb and PCDHB9

DIOPT Version :9

Sequence 1:NP_001287524.1 Gene:Cad96Cb / 43033 FlyBaseID:FBgn0039294 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_061992.3 Gene:PCDHB9 / 56127 HGNCID:8694 Length:797 Species:Homo sapiens


Alignment Length:747 Identity:168/747 - (22%)
Similarity:272/747 - (36%) Gaps:222/747 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LEGGGSAESFLATEDLAVGSII-----------GKL-----RINGDAN-------AETGDINLSL 74
            |.|.|... :..||:...||.:           |:|     |:..|.|       :.||  ||..
Human    25 LAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTG--NLLT 86

  Fly    75 REKNAPVEIHPGTKELALSVELDKE---GVRGPSSIYVNVICIRRHSTDPSFVIPVNVRVTDVND 136
            .||                  ||:|   |.:.|..:|..::     ..||..:....:||.|:||
Human    87 NEK------------------LDREKLCGPKEPCMLYFQIL-----MDDPFQIYRAELRVRDIND 128

  Fly   137 NAPQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLEG-- 199
            ::|.:......|.:||.|..|| ..:..||:|.|: |..|...|.:....:. :::.....||  
Human   129 HSPVFRHKEMVLKISENTAEGT-AFRLERAQDPDE-GHNSIQNYTISSNSFF-HIKISGSDEGMI 190

  Fly   200 --TLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQNPKFQRESYSAEIPADG 262
              .|||.||||.|:.:..::.|.|.|.|:|.|...:.:|:|:.|.:|..|:|.:..|..:.|.:.
Human   191 YPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNVPQFAQALYETQAPENS 255

  Fly   263 RPGELRMRPEPLKAVDQDEGICAPIQYTIVQSQD--AKYFRIHPHNGAISLLTPIGY-------- 317
            ..|.|.::   :.|.|.|.|:.|.:.|:...:.:  ...|:|:|.:|.|.|...:.|        
Human   256 PVGSLIVK---VSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKI 317

  Fly   318 -ADVANGATLVVKATQI-------DNPDRYALT----TVQLTRPG-------------------- 350
             ....:|..|..:.|.:       |||....::    :|....||                    
Human   318 NIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVFKIKDRDSGENGKTI 382

  Fly   351 ---------------------------------------SHSDLST------------------- 357
                                                   :.:||.|                   
Human   383 CYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDN 447

  Fly   358 -LAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYVIPD---------------PVNSQFFSV 406
             .||.|..:.:.:||:            |.|..|:..|...               |.......:
Human   448 APAFTQTSYTLFVREN------------NSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPL 500

  Fly   407 GSL-------GELVLAKPLDYEKMTKHEFQVLATD---GMTNSTAELTLEVIDVNDWEPRFRETH 461
            .||       |.|...:.||||.:...:|:|.|:|   ...:|.|.:.:.|:|.||..|......
Human   501 ASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 565

  Fly   462 YEFMVPKSSLQSRADSFEGVLIGKVEAADGDRNDKLELS---LRGQHAGLFEIDSTGNIYMRPEQ 523
            .....|.:.|..|| :..|.|:.||.|.|||......||   |:....|||.: ...|..:|..:
Human   566 QNGSAPCTELVPRA-AEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGV-WAHNGEVRTAR 628

  Fly   524 LQSLNESTVH-LIAIATDTGVPPRSTSVPVSVTM-EGLT--------LARSGWNSNMLGMF---- 574
            |.|..::..| |:.:..|.|.||||.:..:.|.: :|.:        .|.:...:::|.::    
Human   629 LLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVA 693

  Fly   575 -GMIMGLFLMIIVALSCYIVRSKKQGKSASSG 605
             ..:..|||:.:  |....||..::.::||.|
Human   694 LASVSSLFLLSV--LLFVAVRLCRRSRAASVG 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CbNP_001287524.1 Cadherin_repeat 46..137 CDD:206637 26/116 (22%)
Cadherin_repeat 145..244 CDD:206637 32/102 (31%)
Cadherin_repeat 253..347 CDD:206637 24/115 (21%)
Cadherin_repeat 365..452 CDD:206637 23/111 (21%)
Cadherin_repeat 461..555 CDD:206637 30/97 (31%)
PCDHB9NP_061992.3 Cadherin_2 32..112 CDD:285466 21/105 (20%)
Cadherin_repeat 137..238 CDD:206637 32/103 (31%)
Cadherin_repeat 247..343 CDD:206637 20/98 (20%)
CA 372..449 CDD:214520 3/76 (4%)
Cadherin_repeat 455..557 CDD:206637 24/113 (21%)
Cadherin_repeat 576..664 CDD:206637 29/89 (33%)
Cadherin_C_2 686..768 CDD:293101 10/40 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 777..797
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4632
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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