DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Cb and PCDHGA2

DIOPT Version :10

Sequence 1:NP_001287524.1 Gene:Cad96Cb / 43033 FlyBaseID:FBgn0039294 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_061738.1 Gene:PCDHGA2 / 56113 HGNCID:8700 Length:932 Species:Homo sapiens


Alignment Length:582 Identity:146/582 - (25%)
Similarity:248/582 - (42%) Gaps:106/582 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CYL-----EGGGSAESFLATEDLAVGSIIGK----LRINGDANAETGDINLSLREKNAPVEIHPG 86
            |:|     |.......:...|::..||.:|.    |.:...|.||.| :.:..|.::....::|.
Human    17 CFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQG-VRIVSRGRSQLFALNPR 80

  Fly    87 TKELALSVELDKEGV---RGPSSIYVNVICIRRHSTDPSFVIPVNVRVTDVNDNAPQWIGTPYTL 148
            :..|..:..:|:|.:   ..|..:..|::.     .|...:..|.|.:||:|||||::......|
Human    81 SGSLVTANRIDREELCAQSAPCLLNFNILL-----EDKLTIYSVEVEITDINDNAPRFGVEELEL 140

  Fly   149 TLSEVTVPGTRI-LQGARAEDADQPGPFSTVEYQVLPGPY-----------SEYVQFLNPLEGTL 201
            .:||.|.||.|| |:  .|.||| .|..:..:|.:.|..:           ::|.:        |
Human   141 KISETTTPGFRIPLK--NAHDAD-VGENALQKYALNPNDHFSLDVRRGADGNKYPE--------L 194

  Fly   202 VLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQNPKFQRESYSAEIPADGRPGE 266
            ||:::||.|:.....:.|.|.|.|.|.....:.:.|.:.||:|..|.|.:..|...||.:...| 
Human   195 VLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPENTLVG- 258

  Fly   267 LRMRPEPLKAVDQDEGICAPIQYTIVQS--QDAKYFRIHPHNGAISLLTPIGYADVA-------- 321
              .|...:.|.|.|||..|.:.|.:.:|  :.::.|.:...:|.::::..:.|.|..        
Human   259 --TRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIEA 321

  Fly   322 -NGATLVVKATQI-------DNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTAVGNR 378
             :|..|:.:|..|       ||...:.:|:.    ..|.|:.|....:...|.:..|:.......
Human   322 QDGPGLLTRAKVIVTVLDVNDNAPEFYMTSA----TSSVSEDSLPGTIIGLFNVHDRDSGQNAFT 382

  Fly   379 ILALPTNKPGKHLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDG---MTNST 440
            ..:||.:.|.|..|            ||.:...||..:.||.|:.:.:...:.|.||   ..::.
Human   383 TCSLPEDLPFKLEK------------SVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLSTD 435

  Fly   441 AELTLEVIDVNDWEPRFRETHYEFMVPKSSLQSRADSFEGVLIGKVEAADGDRNDK-------LE 498
            |.:.|:|.|:||..|.|..|.|...:|:::.:       |..:..|.|.|.|.||.       .|
Human   436 AHILLQVADINDNAPAFSRTSYSTYIPENNPR-------GASVFSVTAHDPDSNDNAHVTYSFAE 493

  Fly   499 LSLRGQH-AGLFEIDS-TGNIY-MRP---EQLQSLNESTVHLIAIATDTGVPPRSTSVPVSV 554
            .:::|.. :....|:| ||.:| :|.   |||:.|     .:..||.|:|.||.|::|.:|:
Human   494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDL-----QVWVIARDSGNPPLSSNVSLSL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CbNP_001287524.1 CA_like <80..139 CDD:481204 14/61 (23%)
Cadherin_repeat 145..244 CDD:206637 31/110 (28%)
Cadherin_repeat 253..347 CDD:206637 24/111 (22%)
Cadherin_repeat 365..452 CDD:206637 21/89 (24%)
Cadherin_repeat 461..555 CDD:206637 30/107 (28%)
PCDHGA2NP_061738.1 Cadherin_2 30..112 CDD:462413 16/87 (18%)
Cadherin_repeat 137..238 CDD:206637 31/111 (28%)
Cadherin_repeat 246..343 CDD:206637 21/99 (21%)
Cadherin_repeat 355..448 CDD:206637 25/104 (24%)
Cadherin_repeat 456..558 CDD:206637 30/107 (28%)
Cadherin_repeat 579..666 CDD:206637
Cadherin_C_2 688..772 CDD:465139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 798..841
Cadherin_tail 811..>905 CDD:435046
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 902..932
Blue background indicates that the domain is not in the aligned region.

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