DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Cb and PCDHGB5

DIOPT Version :9

Sequence 1:NP_001287524.1 Gene:Cad96Cb / 43033 FlyBaseID:FBgn0039294 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_061748.1 Gene:PCDHGB5 / 56101 HGNCID:8712 Length:923 Species:Homo sapiens


Alignment Length:760 Identity:171/760 - (22%)
Similarity:298/760 - (39%) Gaps:209/760 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EDLAVGSIIG----------------KLRINGD-----ANAETGDINLSLREKNAPVEIHPGTKE 89
            |::..||::|                |||::.:     .:||:|                    |
Human    39 EEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYFTVSAESG--------------------E 83

  Fly    90 LALSVELDKEGVRG--PSSIYVNVICIRRHSTDPSFVIPVNVRVTDVNDNAPQWIGTPYTLTLSE 152
            |.:|..||:|.:.|  |:.    .:.....:.:|.....|||.:.|:||:.|::....:.|.:||
Human    84 LLVSSRLDREEICGKKPAC----ALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISE 144

  Fly   153 VTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPY-----------SEYVQFLNPLEGTLVLKKA 206
            ...||||.:... ||||| .|..|..:|::...|.           |:|.:        |.|:|.
Human   145 SAQPGTRFILEV-AEDAD-IGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE--------LALEKT 199

  Fly   207 LDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQNPKFQRESYSAEIPADGRPGELRMRP 271
            ||.||.....:.|.|.|.|.||....|.||:.:|||:|..|.|.|:.|...:..:..||...:: 
Human   200 LDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQ- 263

  Fly   272 EPLKAVDQDEGICAPIQYTIVQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNP 336
              :.|.||||||.:.|.|:..::  .:.|.::..:|.|:....:.:.:... .::||:..  |..
Human   264 --VSATDQDEGINSEITYSFYRT--GQIFSLNSKSGEITTQKKLDFEETKE-YSMVVEGR--DGG 321

  Fly   337 DRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTAVGNRILAL------PTNKPGK---HLK 392
            ...|..||::.....:.:...:.|   ..::.:..:.||...::||      .:.:.|:   .|:
Human   322 GLVAQCTVEINIQDENDNSPEVTF---HSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQ 383

  Fly   393 YVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATD---GMTNSTAELTLEVIDVNDWE 454
            ..:|..:.|   |..:..:||....||.|:..::...:.|||   ...:|:..:.|.:.||||..
Human   384 GEVPFKIIS---SSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNA 445

  Fly   455 PRFRETHYEFMVPKSSLQSRADSFEGVLIGKVEAADGDRNDKLELSLRGQHAGLFEIDSTGNIYM 519
            |.|.:..|...||:::.       .|..|.:|.|:|      |:|.|.||.:             
Human   446 PVFHQASYLVSVPENNP-------PGASIAQVCASD------LDLGLNGQVS------------- 484

  Fly   520 RPEQLQSLNESTVHLIAIATDTGVPPRSTSVPVSVTMEGLTLARSGWNSNMLGMFGMIMGLFLMI 584
                 .|:..|.:..:|:|:...:..:|          |:..|:..::...|..|.:.:      
Human   485 -----YSIMASDLEPLALASYVSMSAQS----------GVVFAQRAFDYEQLRTFELTL------ 528

  Fly   585 IVALSCYIVRSKKQGKSASSGLGLGRNRVHSQAHSSVSSANLVTHEKLAGNGNGNGASVT----- 644
                     :::.||                   |...||| |:...|.|:.|.|...|.     
Human   529 ---------QARDQG-------------------SPALSAN-VSLRVLVGDRNDNAPRVLYPALG 564

  Fly   645 SGGVSVLHM-----KHGGNIT--MANPMNNG-----LHHVASGASSSM-ALG-------SSAALL 689
            ..|.::..|     :.|..:|  :|...::|     .:||...:...: :||       ::.||.
Human   565 PDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTARALG 629

  Fly   690 ERERERE------RDRERQRESYAATVRI--------FLPGIVSR 720
            :|:..|:      ||..:...|..||:.:        .||.|..|
Human   630 DRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDR 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CbNP_001287524.1 Cadherin_repeat 46..137 CDD:206637 24/113 (21%)
Cadherin_repeat 145..244 CDD:206637 37/109 (34%)
Cadherin_repeat 253..347 CDD:206637 21/93 (23%)
Cadherin_repeat 365..452 CDD:206637 21/98 (21%)
Cadherin_repeat 461..555 CDD:206637 18/93 (19%)
PCDHGB5NP_061748.1 Cadherin_2 32..112 CDD:285466 18/96 (19%)
Cadherin_repeat 137..238 CDD:206637 37/110 (34%)
Cadherin_repeat 246..339 CDD:206637 21/100 (21%)
Cadherin_repeat 352..444 CDD:206637 22/94 (23%)
Cadherin_repeat 452..554 CDD:206637 32/177 (18%)
Cadherin_repeat 574..658 CDD:206637 17/83 (20%)
Cadherin_C_2 683..764 CDD:293101
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 794..832
Cadherin_tail 800..>896 CDD:292596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 893..923
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4632
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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