DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Cb and PCDHGC5

DIOPT Version :9

Sequence 1:NP_001287524.1 Gene:Cad96Cb / 43033 FlyBaseID:FBgn0039294 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_061752.1 Gene:PCDHGC5 / 56097 HGNCID:8718 Length:944 Species:Homo sapiens


Alignment Length:609 Identity:154/609 - (25%)
Similarity:252/609 - (41%) Gaps:120/609 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QWIYYAILSLCWFNKATLGAILDSRCYLEGGGSAE-SFLATEDLAVGSIIGKLRINGDANAETGD 69
            :|....:||||              |:  |..|.: .:...|:...|:::|  .:..|...:..|
Human    12 KWQVLCMLSLC--------------CW--GWVSGQLRYSVVEESEPGTLVG--NVAQDLGLKMTD 58

  Fly    70 INLSLR-----EKNA---PVEIHPGTKELALSVELDKEGVRGPS-SIYVNVICIRRHSTDPSFVI 125
            : ||.|     |:|.   .:.:..|.  ||::.::|:|.:.|.| |..:.|..:..|   |..:|
Human    59 L-LSRRLQLGSEENGRYFSLSLMSGA--LAVNQKIDRESLCGASTSCLLPVQVVTEH---PLELI 117

  Fly   126 PVNVRVTDVNDNAPQWIGTPYTLTLSEVTVPGTRI-LQGARAEDADQPGPFSTVEYQVLPGPYSE 189
            .|.|.:.|:|||:|.:......:.:||....|.|. |..|:..|...    :||.:..| .|.|.
Human   118 RVEVEILDLNDNSPSFATPEREMRISESAASGARFPLDSAQDPDVGT----NTVSFYTL-SPNSH 177

  Fly   190 YVQFLNPLEG-----TLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQNPKF 249
            :...:..|:.     .|||::.||.|......:.|.|.|.|||.|...||:.|::.|.:|..|.|
Human   178 FSLNVKTLKDGKPFPELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTF 242

  Fly   250 QRESYSAEIPADGRPGELRMRPEPLKAVDQDEGICAPIQYTI---VQSQDAKYFRIHPHNGAISL 311
            |.......||.:...|.|.:|   |.|.|.|||....:.|:.   ........|.:.|.:|||.:
Human   243 QSSVLRVGIPENAPIGTLLLR---LNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHV 304

  Fly   312 LTPIGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSD------LSTLAFVQKRFVMRIR 370
            |.||.:.: :....:..:|.....|.......:|:. .|..:|      |::||       ..:.
Human   305 LGPIDFEE-SRFYEIHARARDQGQPAMEGHCVIQVD-VGDVNDNAPEVLLASLA-------NPVL 360

  Fly   371 EDTAVGNRILAL------PTNKPGKHLKYVIPD------PVNSQFFSVGSLGELVLAKPLDYEKM 423
            |.|.||. ::.|      .:.:.|:....:.||      |..:.:       .|:.::|||.|..
Human   361 ESTPVGT-VVGLFNVRDRDSGRNGEVSLDISPDLPFQIKPSENHY-------SLLTSQPLDREAT 417

  Fly   424 TKHEFQVLATD-GMTNSTAELT--LEVIDVNDWEPRFRETHYEFMVPKSSLQSRADSFEGVLIGK 485
            :.:..::||:| |..:....||  |.:.||||..|||.:..|...:    |::|.   .|.|:..
Human   418 SHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYI----LENRP---PGSLLCT 475

  Fly   486 VEAADGDRNDKLELS-------LRGQHAGLFEIDSTGNIYMRPEQLQSLNEST--------VHLI 535
            |.|:|.|..|...|:       ::|..|..|       :|:.||..:...:.|        :.::
Human   476 VAASDPDTGDNARLTYSIVGNQVQGAPASSF-------VYVNPEDGRIFAQRTFDYELLQMLQIV 533

  Fly   536 AIATDTGVPP--RSTSVPVSVTME 557
            ....|:|.||  .:||:.|.|..|
Human   534 VGVRDSGSPPLHANTSLHVFVLDE 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CbNP_001287524.1 Cadherin_repeat 46..137 CDD:206637 26/99 (26%)
Cadherin_repeat 145..244 CDD:206637 30/104 (29%)
Cadherin_repeat 253..347 CDD:206637 23/96 (24%)
Cadherin_repeat 365..452 CDD:206637 23/101 (23%)
Cadherin_repeat 461..555 CDD:206637 25/110 (23%)
PCDHGC5NP_061752.1 Cadherin_2 30..111 CDD:285466 19/85 (22%)
Cadherin_repeat 139..238 CDD:206637 30/103 (29%)
Cadherin_repeat 246..346 CDD:206637 24/104 (23%)
Cadherin_repeat 359..450 CDD:206637 24/98 (24%)
Cadherin_repeat 459..560 CDD:206637 27/113 (24%)
Cadherin_repeat 578..670 CDD:206637
Cadherin_C_2 689..791 CDD:293101
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 722..747
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 812..853
Cadherin_tail 821..>917 CDD:292596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..944
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4632
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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