DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Cb and si:ch73-379j16.2

DIOPT Version :9

Sequence 1:NP_001287524.1 Gene:Cad96Cb / 43033 FlyBaseID:FBgn0039294 Length:789 Species:Drosophila melanogaster
Sequence 2:XP_017214536.1 Gene:si:ch73-379j16.2 / 108179154 ZFINID:ZDB-GENE-141215-68 Length:791 Species:Danio rerio


Alignment Length:845 Identity:176/845 - (20%)
Similarity:292/845 - (34%) Gaps:219/845 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QWIYYAILSLCWFNKATLGAILDSRCYLEGGGSAESFLATEDLAVGSIIGKLRINGDANAETGDI 70
            :|.|:.| ||.::....||..:.::.         .:...|::..|:|:|.:         ..|:
Zfish     9 RWEYWWI-SLLFYLLTCLGQRVSAQI---------RYSIPEEVKEGTIVGNI---------AKDL 54

  Fly    71 NLSLR------------EKNAPVEIHPGTKELALSVELDKEGVRGPSSIYVNVICIRRHST---D 120
            .|.:.            ..:|..:::.....|.:...:|:|.:...     |..|:....|   :
Zfish    55 GLDVSTLLDRRFRIVSGSNDALFQVNQNNGMLYVGKLIDREALCDG-----NTACLISLKTVVEN 114

  Fly   121 PSFVIPVNVRVTDVNDNAPQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPG 185
            |..:..|.|.:|||||:||.:......|.:.|.|:|| ...|...|.|.|. |..|...|::...
Zfish   115 PLEIHYVEVEITDVNDHAPSFANKDVLLEIQESTIPG-EDFQLQEAYDPDS-GVNSVRFYKLSQT 177

  Fly   186 PYSEYVQFLNPLE---GTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQNP 247
            .|.|.....|..|   ..|.|:|:||.|:....::.:.|.|.|..||...|::.|.:.|.:|..|
Zfish   178 EYFEIELRENGGEKKVPVLKLRKSLDRERQVIHSLIVTAVDGGNQPRSGSTVINVTVLDDNDNRP 242

  Fly   248 KFQRESYSAEIPADGRPGELRMRPEPLKAVDQDEGICAPIQYTIVQSQDAKYFRIHPHNGAISLL 312
            ||.:|.||..:..:...|.|.::   |.|.|.|||....|.|:.|:                   
Zfish   243 KFSQELYSVSLRENAPLGTLVIK---LNATDLDEGQNGEIVYSFVK------------------- 285

  Fly   313 TPIGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTAVGN 377
                                  |.::|...|                                  
Zfish   286 ----------------------NIEKYIYDT---------------------------------- 294

  Fly   378 RILALPTNKPGKHLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATD-GM--TNS 439
                                      |.:.:.||:.:...||:||...:...|:|:| |.  ..|
Zfish   295 --------------------------FDLDNTGEIRVKGSLDFEKNNVYRIAVMASDKGQPPKTS 333

  Fly   440 TAELTLEVIDVNDWEPRFRETHYEFMVPKSSLQSRADSFEGVLIGKVEAADGDRNDKLELSLRGQ 504
            ...:.::|||.||..|....|....:||:       ||..|.:|..|...|.|.....::..|..
Zfish   334 NCRIIIKVIDENDNAPEIEVTSLSDVVPE-------DSKPGAVISLVSITDKDSGVNGKVVCRIS 391

  Fly   505 HAGLFEIDST--GNIYMRPEQLQSLNESTVH--LIAIATDTGVPPRSTSVPVSVTMEGLTLARSG 565
            ....||:..:  .|:|......:...|.|.|  :...|||.|.||.|       :::.|.:..|.
Zfish   392 DDVPFELKPSFKDNMYSLVTNAKLDRELTSHYDVTITATDLGQPPLS-------SIKTLKVQISD 449

  Fly   566 WNSNMLGMFGMIMGLFLM-------IIVALSCY-------------IVRSKKQGKSASSGLGLGR 610
            .|.|........:.|:||       .|.::|.:             |:|.:......||.|.:..
Zfish   450 VNDNAPEFVHNPLELYLMENNAPGASIYSVSAFDRDLNENAAITYQIIREEGTRSHMSSFLNVNA 514

  Fly   611 NRVHSQAHSSVSSANLVTHE-KLAGNGNGNGASVTSGGVSVLHMKHGGNITM------AN----- 663
            :..|..|..|....::.|.: .:....:|:.:..::..|:|..:....|:.:      ||     
Zfish   515 DNGHIHALKSFDFESVKTFQFHILATDSGSPSLSSNVTVNVFILDQNDNVPVILYPVSANGSAEG 579

  Fly   664 ----PMN-NGLHHVASGASSSMALGSSAALLERERERERDRERQRESYAATVRIFLPGIVSRASA 723
                |.| |..|.|....:....:|.:..||...:|.........:.|...:|..          
Zfish   580 VEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSEHSLFALDRYTGQIRTL---------- 634

  Fly   724 NGQLFEEDEIEHDSLQTENNNRKVAATGVASGGVTTISTTPANAGSNLLSATDAMGSSENNLTVY 788
             ....|.||.:|..:....:|..|:.:..|:..|..:....|.|.|::.:|  .....|||:|.|
Zfish   635 -RSFTETDEAQHKLVILVKDNGNVSLSATATVIVKVVEPKEAFAASDVKNA--EKDEEENNVTFY 696

  Fly   789  788
            Zfish   697  696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CbNP_001287524.1 Cadherin_repeat 46..137 CDD:206637 20/105 (19%)
Cadherin_repeat 145..244 CDD:206637 30/101 (30%)
Cadherin_repeat 253..347 CDD:206637 16/93 (17%)
Cadherin_repeat 365..452 CDD:206637 15/89 (17%)
Cadherin_repeat 461..555 CDD:206637 24/97 (25%)
si:ch73-379j16.2XP_017214536.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 130 1.000 Inparanoid score I4620
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.050

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