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Protein Alignment CG31103 and sv2ca

DIOPT Version :9

Sequence 1:	NP_001097914.1	Gene:	CG31103 / 43030	FlyBaseID:	FBgn0051103	Length:	506	Species:	Drosophila melanogaster
Sequence 2:	NP_001121811.1	Gene:	sv2ca / 562345	ZFINID:	ZDB-GENE-060526-233	Length:	745	Species:	Danio rerio

Alignment Length:	586	Identity:	120/586 - (20%)
Similarity:	226/586 - (38%)	Gaps:	141/586 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 YDMVLEKIGYGKTQWVLLLVSGLLTITSVAAQQAMSIIVIASQCEFETTQAEKGVMMAASVTGIF 81
            |::::::.|:|:.||.|....||..::.......:..::.:::.:.....:..|.:.:....|:.
Zfish   140 YELIIQECGHGRFQWQLFFTLGLALMSDGVEVFVVGFVLPSAETDMCVPDSSSGWLGSIVYLGMM 204

  Fly    82 LSTYIWGYISDDIGRRRVLLYGNFASNALQFVLMFVTSVWLFNIINLLVGISVGAVSAALYAYLS 146
            :..:.||.::|.:|||:.||.....:....|:..||....||.:..::.|..:|.....:::|.:
Zfish   205 VGAFFWGGMADKVGRRQCLLICMSLNGFFAFLSSFVQGYGLFLLCRMIAGFGIGGAVPIVFSYFA 269

  Fly   147 EFNIPRHRAVAINYSTMFVSVTAIYVPATAWLVLS------------------SNWAITMGD-FV 192
            |......|...:::..||..:..||..|.||.::.                  ::|:.:||. :.
Zfish   270 EVLAREKRGEHLSWLCMFWMIGEIYASAMAWAIIPHYGQITTASSQFINYHHYTSWSFSMGSAYQ 334

  Fly   193 FRPWRLLLLVSLLPGFIGGLILLYYPESPKFLLSQEKNNEAIEAVAWISKFN---RGKSIQQVLS 254
            |..||:.::|..||.....:.|.:.||||:|.|...|::||...:..|...|   ||:. ::|.:
Zfish   335 FHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVGKHDEAWMILKQIHDTNMRARGQP-EKVFT 398

  Fly   255 CDEFTLKSEDPVGENLLGESQGCGILSKICRATIPLFHKPHG--FNFILC----------NLAL- 306
            .:.  :|....:.|.:.....|......|.|....|    ||  .||:.|          .||:
Zfish   399 VNR--IKIPKQIDEFVEMHESGNFFSKAIFRIKTEL----HGIWLNFLKCFNYPVKESTVKLAIV 457

  Fly   307 -----FGMFFSSNGMQLWFPEIVNR-------SSGAENNSSTV---------------------- 337
                 ||.:    |:.:|||:::..       |.|..:|:..:
Zfish   458 WLTLSFGYY----GLSVWFPDVIKHLQNDEYASKGQRHNNERIEDFTFNFTLENQIHTNSLFIND 518

  Fly   338 ----------------------------------CEILSVPVEQPNVTET-LDCTDPISS----- 362
                                              |..:.......::.:: |..||.|:|
Zfish   519 RFINMKFKSVTFINSTFQSCFFEDVTSVGSFFRNCTFIEAVFYNTDIDDSKLKNTDVINSTFYHN 583

  Fly   363 KT---------------YIDNLVVGFAFLIGFSIQGLILNPLGRKNVLLAALAVATLSGVLLHFM 412
            ||               |..|.:...|.|.|..:..|:::.:||.::|..::.::.:|...|.|.
Zfish   584 KTGCQMTFEDDYSAYWVYFVNFLGTLAVLPGNIVSALLMDKIGRLSMLGFSMILSGISCFFLWFG 648

  Fly   413 ESPTGVLVLFCLYILLPGLSISIMIGAIV---DLVPTHLRSKAVSFCMSLGRLGIIAATNLMGVM 474
            .|.:.::.:.|||   .|||||......|   :|.||..|.....||.:|.:|..:....:.|.:
Zfish   649 TSESMMIGMLCLY---NGLSISAWNSLDVVTTELYPTDRRGTGFGFCNALCKLAAVMGNLIFGSL 710

  Fly   475 L 475
            :
Zfish   711 V 711

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.