DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31103 and Sv2a

DIOPT Version :10

Sequence 1:NP_001097914.1 Gene:CG31103 / 43030 FlyBaseID:FBgn0051103 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_476558.2 Gene:Sv2a / 117559 RGDID:619715 Length:742 Species:Rattus norvegicus


Alignment Length:584 Identity:124/584 - (21%)
Similarity:214/584 - (36%) Gaps:152/584 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YDMVLEKIGYGKTQWVLLLVSGLLTITSVAAQQAMSIIVIASQCEFETTQAEKGVMMAASVTGIF 81
            |:.:|.:.|:|:.||.|..|.||..:........:..::.:::.:...:.:.||::......|:.
  Rat   152 YETILRECGHGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMM 216

  Fly    82 LSTYIWGYISDDIGRRRVLLYGNFASNALQFVLMFVTSVWLFNIINLLVGISVGAVSAALYAYLS 146
            :..::||.::|.:|||:.||.....::...|...||.....|....||.|:.:|.....:::|.|
  Rat   217 VGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFS 281

  Fly   147 EFNIPRHRAVAINYSTMFVSVTAIYVPATAWLVLSS-NWAITMGD-FVFRPWRLLLLVSLLPGFI 209
            ||.....|...:::..||..:..:|..|.||.::.. .|:..||. :.|..||:.:||...|...
  Rat   282 EFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVF 346

  Fly   210 GGLILLYYPESPKFLLSQEKNNEAIEAVAWISKFN-RGKS-IQQVLSCDEF-TLKSEDPVGE--- 268
            ....|...||||:|.|...|::||...:..:...| |.|. .::|.|.... |:..||.:.|   
  Rat   347 AIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDELIEIQS 411

  Fly   269 --------------NLLGESQGCGILSKICRATIPLFHKPHGFNFILC--------NLALFG--- 308
                          :|.|:..|                     ||:.|        .|.:.|   
  Rat   412 DTGTWYQRWGVRALSLGGQVWG---------------------NFLSCFSPEYRRITLMMMGVWF 455

  Fly   309 -MFFSSNGMQLWFPEIVNRSSGAE---------------------------------NNSSTVCE 339
             |.||..|:.:|||:::......:                                 |:......
  Rat   456 TMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLR 520

  Fly   340 ILSVPVEQPNVTETLDCTDPISSKTYIDNL----------------------------------- 369
            :.||..|. ::.|.....|..||.|:..|.                                   
  Rat   521 LKSVSFED-SLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHNKEGCP 584

  Fly   370 --VVG----------------FAFLIGFSIQGLILNPLGRKNVLLAALAVATLSGVLLHFMESPT 416
              |.|                .|.|.|..:..|:::.:||..:|..:..::.:|...|.|..|.:
  Rat   585 LDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVLSCVSCFFLSFGNSES 649

  Fly   417 GVLVLFCLYILLPGLSI---SIMIGAIVDLVPTHLRSKAVSF----CMSLGRLGIIAATNLMGV 473
            .::.|.||:   .|:||   :.:....|:|.|:..|:.|..|    |.....|||...|:.:|:
  Rat   650 AMIALLCLF---GGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGI 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31103NP_001097914.1 synapt_SV2 <17..>324 CDD:130366 83/340 (24%)
Sv2aNP_476558.2 synapt_SV2 1..742 CDD:130366 124/584 (21%)
Interaction with SYT1 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.

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