DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31103 and Sv2b

DIOPT Version :10

Sequence 1:NP_001097914.1 Gene:CG31103 / 43030 FlyBaseID:FBgn0051103 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_476555.1 Gene:Sv2b / 117556 RGDID:619716 Length:683 Species:Rattus norvegicus


Alignment Length:591 Identity:128/591 - (21%)
Similarity:233/591 - (39%) Gaps:137/591 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YDMVLEKIGYGKTQWVLLLVSGLLTITSVAAQQAMSIIVIASQCEFETTQAEKGVMMAASVTGIF 81
            |:.::::.|:|:.||.|..|..|..:........:|..:.:::.:...:.::||::......|:.
  Rat    95 YETIIDECGHGRFQWTLFFVLVLALMADGVEVFVVSFALPSAEKDMCLSSSKKGMLGLIVYLGMM 159

  Fly    82 LSTYIWGYISDDIGRRRVL-----LYGNFASNALQFVLMFVTSVWLFNIINLLVGISVGAVSAAL 141
            ...:|.|.::|.:||::||     :..:|||     :..||.....|....|:.||.:|.....:
  Rat   160 AGAFILGGLADKLGRKKVLSMSLAINASFAS-----LSSFVQGYGAFLFCRLISGIGIGGSLPIV 219

  Fly   142 YAYLSEFNIPRHRAVAINYSTMFVSVTAIYVPATAWLVLSS-NWAITMG-DFVFRPWRLLLLVSL 204
            :||.|||.....|...:::..:|.....||..|.||.::.. .|..:|| ::.|..||:.::|..
  Rat   220 FAYFSEFLSREKRGEHLSWLGIFWMTGGIYASAMAWSIIPHYGWGFSMGTNYHFHSWRVFVIVCA 284

  Fly   205 LPGFIGGLILLYYPESPKFLLSQEKNNEAIEAVAWISKFN-RGKSIQQVLSCDEFT---LKSEDP 265
            ||..:..:.|.:.||||:|||...|::||...:..:...| |.|...:.:    ||   :|:...
  Rat   285 LPATVSMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNMRAKGTPEKV----FTVSHIKTPKQ 345

  Fly   266 VGENL-LGESQG----------CGILSKICRATIPLFHKPHGFNFILCNLALFGMFFSSNGMQLW 319
            :.|.: :..|.|          ..|..::....:.....|:..|.::..:..|.|..|..|:.:|
  Rat   346 MDEFIEIQSSTGTWYQRWLVRFMTIFKQVWDNALYCVMGPYRMNTLILAVVWFTMALSYYGLTVW 410

  Fly   320 FPEIVNRSSGAENNS------------STVCEILSVPVEQ------------------------- 347
            ||:::......|..|            :|:...:...:.|                         
  Rat   411 FPDMIRYFQDEEYKSKMKVFFGEHVHGATINFTMENQIHQHGKLVNDKFIKMYFKHVLFEDTFFD 475

  Fly   348 ----PNVTET----LDCTDPISSKTYI----------------------------------DNLV 370
                .:||.|    .:||  |.|.|:.                                  |.|:
  Rat   476 KCYFEDVTSTDTYFKNCT--IESTTFYNTDLYKHKFIDCRFINSTFLEQKEGCHMDFEEDNDFLI 538

  Fly   371 VGFAFLIGFS------IQGLILNPLGRKNVLLAALAVATLSGVLLHFMESPTGVLVLFCLYILLP 429
            ...:||...|      |..|:::.:||..::..::.::.:....|.|..|.:.::...||:.   
  Rat   539 YLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCFFLFFGNSESAMIGWQCLFC--- 600

  Fly   430 GLSISI--MIGAI-VDLVPTHLRSKAVSFCMSLGRLGIIAATNLMGVMLQPYCNTTFAMFT-CTL 490
            |.||:.  .:..| |:|.||:.|:.|......|.:||.|..            ||.||.|. .|.
  Rat   601 GTSIAAWNALDVITVELYPTNQRATAFGILNGLCKLGAILG------------NTIFASFVGITK 653

  Fly   491 IVCIVI 496
            :|.|::
  Rat   654 VVPILL 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31103NP_001097914.1 synapt_SV2 <17..>324 CDD:130366 80/328 (24%)
Sv2bNP_476555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72
synapt_SV2 8..683 CDD:130366 128/591 (22%)
Blue background indicates that the domain is not in the aligned region.

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