DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31103 and sv2c

DIOPT Version :9

Sequence 1:NP_001097914.1 Gene:CG31103 / 43030 FlyBaseID:FBgn0051103 Length:506 Species:Drosophila melanogaster
Sequence 2:XP_002934873.1 Gene:sv2c / 100490137 XenbaseID:XB-GENE-960877 Length:725 Species:Xenopus tropicalis


Alignment Length:565 Identity:121/565 - (21%)
Similarity:221/565 - (39%) Gaps:115/565 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YDMVLEKIGYGKTQWVLLLVSGLLTITSVAAQQAMSIIVIASQCEFETTQAEKGVMMAASVTGIF 81
            |::::::.|:|:.||.|..|.|:..:........:..::.:::.:.....:..|.:.:....|:.
 Frog   136 YELIIQECGHGRFQWTLFFVLGMALMADGVEVFVVGFVLPSAETDMCIPDSGSGWLGSIVYLGMM 200

  Fly    82 LSTYIWGYISDDIGRRRVLLYGNFASNALQFVLMFVTSVWLFNIINLLVGISVGAVSAALYAYLS 146
            :..:.||.::|.:||::.||.....:....|:..||....||.:..||.|..:|......::|.|
 Frog   201 VGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGLFLVCRLLSGFGIGGALPTAFSYFS 265

  Fly   147 EFNIPRHRAVAINYSTMFVSVTAIYVPATAWLVLSS-NWAITMGD-FVFRPWRLLLLVSLLPGFI 209
            |......|...:::..||..:..||..|.||.::.. .|:.:||. :.|..||:.::|..||...
 Frog   266 EVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVS 330

  Fly   210 GGLILLYYPESPKFLLSQEKNNEAIEAVAWISKFN---RGKSIQQVLSCDEFTLKSEDPVGENLL 271
            ..:.|.:.||||:|||...|::||...:..|...|   ||:. ::|.:...  :|:...:.|.:.
 Frog   331 AVVALTFMPESPRFLLETGKHDEAWMILKQIHDTNMRARGEP-EKVFTVQR--IKTPKQIDELIE 392

  Fly   272 GESQGCGILSKICRATI------------PLFHKPHGFNFILCNLALFGMFFSSNGMQLWFPEIV 324
            .||. .|...|.|...|            ..|..|...|.|...:....:.|...|:.:||.:::
 Frog   393 IESD-TGTWYKRCFVRIRTEFYGIWLTFMRCFEYPVKDNTIKLTIVWLTLSFGYYGLSVWFSDVI 456

  Fly   325 NRSSGAEN-------NSSTVC-------------------------------------------- 338
            ......|.       |.||:.                                            
 Frog   457 KHLQADEYASRVKRFNGSTIADYKFNYTLENQIHKNAVFINDRFISMKFKSVVFQDSLFERCYFE 521

  Fly   339 EILSVPVEQPNVT-------------------ETLDCT-------------DPISSK-TYIDNLV 370
            ::.|:.....|.|                   :|::||             |..|:. .|..|.:
 Frog   522 DVTSINTYFRNCTLIDTHFVNTDLEKYKFTDSQTINCTFTIPKIGCQITFDDDYSAYWIYFVNFL 586

  Fly   371 VGFAFLIGFSIQGLILNPLGRKNVLLAALAVATLSGVLLHFMESPTGVLVLFCLYILLPGLSISI 435
            ...|.|.|..:..|:::.:||..:|..::.::.:|..||.|..|.:.::.:.|:|   .||:||.
 Frog   587 GTLAVLPGNIVSALLMDKIGRLTMLGGSMVLSGISCFLLWFGTSESMMVGMLCVY---NGLTISA 648

  Fly   436 ---MIGAIVDLVPTHLRSKAVSF----CMSLGRLGIIAATNLMGV 473
               :....|:|.||..|:....|    |.....||.:...:|:|:
 Frog   649 WNSLDVVTVELYPTDKRATGFGFLNALCKGAAVLGNLIFGSLVGI 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31103NP_001097914.1 2A0115 29..475 CDD:273327 118/553 (21%)
MFS 34..>189 CDD:119392 32/155 (21%)
sv2cXP_002934873.1 synapt_SV2 1..725 CDD:130366 121/565 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208328at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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