DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31103 and sv2ba

DIOPT Version :10

Sequence 1:NP_001097914.1 Gene:CG31103 / 43030 FlyBaseID:FBgn0051103 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001076464.1 Gene:sv2ba / 100009626 ZFINID:ZDB-GENE-070209-134 Length:689 Species:Danio rerio


Alignment Length:590 Identity:127/590 - (21%)
Similarity:223/590 - (37%) Gaps:141/590 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHSSLESNTLGPNVWDYDMVLEKIGYGKTQWVLLLVSGLLTITSVAAQQAMSIIVIASQCEFETT 65
            |.:.:|..|| |:  .|:.::|..|:|:.||.|..:.||..:........:|..:.:::.:...:
Zfish    86 MAAEVEEETL-PD--QYESIMEDCGHGRFQWTLFTLLGLALMADGVECFVVSFALPSAEKDMCLS 147

  Fly    66 QAEKGVMMAASVTGIFLSTYIWGYISDDIGRRRVLLYGNFASNALQFVLMFVTSVWLFNIINLLV 130
            .|:||::......|:.:...:||.::|.:||::.|||....:....|:..|......|....|..
Zfish   148 NADKGMLGLIVYVGMMIGAVVWGGLADKLGRKQCLLYALAINCIFSFLSCFAQGYGFFIFFRLCS 212

  Fly   131 GISVGAVSAALYAYLSEFNIPRHRAVAINYSTMFVSVTAIYVPATAW-LVLSSNWAITMG-DFVF 193
            ||.:|.....:|.|.:||.....|...:::..:|..:..:|...||| ::....|..:|| :|.|
Zfish   213 GIGIGGSIPVVYTYYAEFLQMDKRGEHLSWLCLFWMLGGLYASFTAWGIIPHYGWGFSMGTEFQF 277

  Fly   194 RPWRLLLLVSLLPGFIGGLILLYYPESPKFLLSQEKNNEA------IEAVAWISKF--NRGKSIQ 250
            ..||:.:||..||.......|::.||||:|||...:::||      :....|.:|.  .|...:.
Zfish   278 HSWRVFVLVCFLPSVAALAGLVFMPESPRFLLESARHDEAWMILRRVHDTNWGAKGEPERVFQVS 342

  Fly   251 QV----LSCDEF-TLKSE----------------DPVGENLLGESQGCGILSKICRATIPLFHKP 294
            |:    ...||| .::||                ..|.:|:|          .:....:.|    
Zfish   343 QIKTPQTQDDEFIEIQSETGTAFQRFMVRQMTLVKQVMKNML----------SLAAPDVRL---- 393

  Fly   295 HGFNFILCNLALFGMFFSSNGMQLWFPEIVNRSSGAENNSSTV---------------------- 337
            ||. ||.  :..|.|.||..|:..|||:.:......|..|:..                      
Zfish   394 HGL-FIA--IVWFTMAFSYYGLGTWFPDQIKYLQFEEYESNVKIFHRERVERFHFNFTLQNQLHK 455

  Fly   338 -----------CEILSVPVEQP----------NVTETL--DCT--DPISSKT------------- 364
                       .||.:|..|..          ..|||.  :||  :.:...|             
Zfish   456 EGEYVHDRFINIEIRNVKFEDSLFENCYFEDIKSTETFFENCTLKNTVFYNTDLWEDSKFINCNL 520

  Fly   365 ------------------------YIDNLVVGFAFLIGFSIQGLILNPLGRKNVL---LAALAVA 402
                                    |:|:.:...:.:.|..:.||:::.:||..::   :...||.
Zfish   521 ENTTFLHPKKGCHLNFQEENDILIYLDSFLGSLSVIPGNILAGLLMDKIGRLKIIGGSMLGSAVC 585

  Fly   403 TLSGVLLHFMESPTGVLVLFCLYILLPGLSISIMIGAIVDLVPTHLRSKAVSFCMSLGRLGIIAA 467
            |.. :||.|  |...|::..||:......:.:.:....|:|.|...|:.|........:|..|.:
Zfish   586 TFF-LLLCF--SQWAVVLFQCLFFAAGAAAWNGIEVVTVELYPASKRATAFGVLNGTCKLAAIIS 647

  Fly   468 TNLMG 472
            :.:.|
Zfish   648 SFIFG 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31103NP_001097914.1 synapt_SV2 <17..>324 CDD:130366 85/337 (25%)
sv2baNP_001076464.1 synapt_SV2 36..689 CDD:130366 127/590 (22%)

Return to query results.
Submit another query.