DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and AT4G18250

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001319982.1 Gene:AT4G18250 / 827551 AraportID:AT4G18250 Length:689 Species:Arabidopsis thaliana


Alignment Length:780 Identity:150/780 - (19%)
Similarity:269/780 - (34%) Gaps:279/780 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SWRRRSLLLTIIVVTATVVSLISQEAEAHNQNAPPILYVRERNWRISETEKVGQIIDR-VRAEDP 84
            |||.:        |:.|..:|.:.|..|  .|||...|              |.|..| :.:.|.
plant    75 SWRSQ--------VSTTGFTLKTGEERA--INAPSSWY--------------GLISARTLCSNDS 115

  Fly    85 DGDDLIFGIEPRFSLPGGENDA-----------SPPEKIPFQIDR---ETGVVTLNESLAGRAGQ 135
            .|:         ||...|:.::           ||...:.|:||.   .:.:::|      ..|.
plant   116 TGN---------FSCATGDCESGEIECPGTYKWSPVTYVIFRIDDGQINSYIISL------EFGY 165

  Fly   136 NFLIYIT------VTDGSYTAKNEVFINILGEREN------SSGYRPQTSISNVVHNISQFLPRF 188
            |..:.:.      ::.|.....|:...|.|.|...      .|..|...|..|...|..::....
plant   166 NLPLTVVPSNPACISSGCMVDLNKTCPNDLKEFSRRGLVACKSACRQSASDENCCTNYFKYKQTC 230

  Fly   189 DQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFGPPPFGNNYPPPPPNIPGVRGEQSGEEEQPDEEV 253
            ...|.||:.....|::              :..|..|||......|              ..:.|
plant   231 KPTPYVQNFDRACPSA--------------YSYPFSGNNSTFTCTN--------------STDYV 267

  Fly   254 TPTTPVRISSTTPKSRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKSGTIPI 318
            ....|..|.:||..|..:| |...:||.|                   ...||.     .|:..:
plant   268 ITFCPSSIPNTTSSSMAQL-PQPKHNSLR-------------------KLKPIL-----GGSAAL 307

  Fly   319 VVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQW 383
            :|.:....:|:.|                            ::..::..|.|.|::..::||   
plant   308 IVLISIVVIALVV----------------------------RARHAKRKSELNDENIEAVVM--- 341

  Fly   384 QGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSG 448
                  ..|| .:|:.::|           ||                                 
plant   342 ------LKRY-SFEKVKKM-----------TN--------------------------------- 355

  Fly   449 APENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAVKTLKESATEV 513
                                  .|.:::|:|.||.|::.:..:.:|.:    :|:|.||||  :.
plant   356 ----------------------SFDHVIGKGGFGTVYKGKLPDASGRD----IALKILKES--KG 392

  Fly   514 DRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGK 578
            :.::.::|| |..|...|:|:|.|.|.|.:.....:|.|::..|.|..::..:.:.:....|   
plant   393 NGEEFINEL-VSMSRASHVNIVSLFGFCYEGSQRAIIYEFMPNGSLDKFISENMSTKIEWKT--- 453

  Fly   579 SNVLTSCDLTSFMYQVAKGMDYLTS---RGIIHRDLAARNILITDDHTCKVADFGFA-----RDV 635
                    |.:....||:|::||.:   ..|:|.|:..:||||.:|...|::|||.|     ::.
plant   454 --------LYNIAVGVARGLEYLHNSCVSKIVHFDIKPQNILIDEDLCPKISDFGLAKLCKKKES 510

  Fly   636 ITSKIYERKSEGKLPIRWMATESLYDNIFSV--KSDIWSFGILMWEIVTLGSTP----------- 687
            |.|.:..|.:.|     ::|.|....|...|  |||::|:|:::.|::  |:|.           
plant   511 IISMLDARGTVG-----YIAPEMFSKNYGGVSHKSDVYSYGMVVLEMI--GATKREEVETSATDK 568

  Fly   688 ---------YPGISAADVMRKVRDG-YRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLD 742
                     |..:...:.||.:.|. ...|:.|...:.:..:..:|...:|.:||...::::||:
plant   569 SSMYFPDWVYEDLERKETMRLLEDHIIEEEEEEKIVKRMTLVGLWCIQTNPSDRPPMRKVVEMLE 633

  Fly   743  742
            plant   634  633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 21/119 (18%)
STYKc 470..741 CDD:214568 73/301 (24%)
PTKc 474..742 CDD:270623 73/298 (24%)
AT4G18250NP_001319982.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I1951
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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