DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and ATMRK1

DIOPT Version :10

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_191885.1 Gene:ATMRK1 / 825501 AraportID:AT3G63260 Length:391 Species:Arabidopsis thaliana


Alignment Length:409 Identity:106/409 - (25%)
Similarity:156/409 - (38%) Gaps:116/409 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 GIATSQLSTGVTNGGVSSP---GVPSPGTGEP-----------------GSNLGPGCLTGGAGSS 447
            |.|...|..|   .|.:.|   |..|...||.                 |.......||..| |:
plant     6 GEADKSLEIG---SGTADPKIGGTGSRSAGEERYFRADTLDFSKWDLHMGQTSTSSVLTNSA-ST 66

  Fly   448 GAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAVKTL------ 506
            .||..|.      ..||....:|...::|..|.:|.|:|       |......||||.|      
plant    67 SAPAPAM------QEWEIDLSKLDMKHVLAHGTYGTVYR-------GVYAGQEVAVKVLDWGEDG 118

  Fly   507 --KESATEVDRKDLLSELEVMKSLEPHINVVHLLG----------------------------CC 541
              ..:.|...|.....|:.|.:.|: |.||...:|                            ||
plant   119 YATPAETTALRASFEQEVAVWQKLD-HPNVTKFIGASMGTSDLRIPPAGDTGGRGNGAHPARACC 182

  Fly   542 TDKDPTFVILEYVNRGKLQTYL-RSSRAERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRG 605
                   |::|||..|.|:.:| :..||:            |...|:......:|:|:.||.|:.
plant   183 -------VVVEYVAGGTLKKFLIKKYRAK------------LPIKDVIQLALDLARGLSYLHSKA 228

  Fly   606 IIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLP---------IRWMATESLYD 661
            |:|||:.:.|:|:..:.|.|:||||.||           .|.:.|         :.:||.|.|..
plant   229 IVHRDVKSENMLLQPNKTLKIADFGVAR-----------VEAQNPQDMTGETGTLGYMAPEVLEG 282

  Fly   662 NIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRK-VRDGYRLEKPEHCRRELYNIMYYCWS 725
            ..::.|.|::|||:.:|||... ..||...|.|::... |....|.|.|:.|...:.|||..||.
plant   283 KPYNRKCDVYSFGVCLWEIYCC-DMPYADCSFAEISHAVVHRNLRPEIPKCCPHAVANIMKRCWD 346

  Fly   726 HDPQERPLFAEIIQMLDKL 744
            .:|..||...|::::|:.:
plant   347 PNPDRRPEMEEVVKLLEAI 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
PTKc 474..742 CDD:270623 84/314 (27%)
ATMRK1NP_191885.1 STKc_MAP3K-like 89..362 CDD:270901 84/311 (27%)
Blue background indicates that the domain is not in the aligned region.

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