DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and ATMRK1

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_191885.1 Gene:ATMRK1 / 825501 AraportID:AT3G63260 Length:391 Species:Arabidopsis thaliana


Alignment Length:409 Identity:106/409 - (25%)
Similarity:156/409 - (38%) Gaps:116/409 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 GIATSQLSTGVTNGGVSSP---GVPSPGTGEP-----------------GSNLGPGCLTGGAGSS 447
            |.|...|..|   .|.:.|   |..|...||.                 |.......||..| |:
plant     6 GEADKSLEIG---SGTADPKIGGTGSRSAGEERYFRADTLDFSKWDLHMGQTSTSSVLTNSA-ST 66

  Fly   448 GAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAVKTL------ 506
            .||..|.      ..||....:|...::|..|.:|.|:|       |......||||.|      
plant    67 SAPAPAM------QEWEIDLSKLDMKHVLAHGTYGTVYR-------GVYAGQEVAVKVLDWGEDG 118

  Fly   507 --KESATEVDRKDLLSELEVMKSLEPHINVVHLLG----------------------------CC 541
              ..:.|...|.....|:.|.:.|: |.||...:|                            ||
plant   119 YATPAETTALRASFEQEVAVWQKLD-HPNVTKFIGASMGTSDLRIPPAGDTGGRGNGAHPARACC 182

  Fly   542 TDKDPTFVILEYVNRGKLQTYL-RSSRAERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRG 605
                   |::|||..|.|:.:| :..||:            |...|:......:|:|:.||.|:.
plant   183 -------VVVEYVAGGTLKKFLIKKYRAK------------LPIKDVIQLALDLARGLSYLHSKA 228

  Fly   606 IIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLP---------IRWMATESLYD 661
            |:|||:.:.|:|:..:.|.|:||||.||           .|.:.|         :.:||.|.|..
plant   229 IVHRDVKSENMLLQPNKTLKIADFGVAR-----------VEAQNPQDMTGETGTLGYMAPEVLEG 282

  Fly   662 NIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRK-VRDGYRLEKPEHCRRELYNIMYYCWS 725
            ..::.|.|::|||:.:|||... ..||...|.|::... |....|.|.|:.|...:.|||..||.
plant   283 KPYNRKCDVYSFGVCLWEIYCC-DMPYADCSFAEISHAVVHRNLRPEIPKCCPHAVANIMKRCWD 346

  Fly   726 HDPQERPLFAEIIQMLDKL 744
            .:|..||...|::::|:.:
plant   347 PNPDRRPEMEEVVKLLEAI 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 85/317 (27%)
PTKc 474..742 CDD:270623 84/314 (27%)
ATMRK1NP_191885.1 STKc_MAP3K-like 89..362 CDD:270901 84/311 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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