DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cad96Ca and AT3G53810

DIOPT Version :9

Sequence 1:	NP_651349.1	Gene:	Cad96Ca / 43026	FlyBaseID:	FBgn0022800	Length:	773	Species:	Drosophila melanogaster
Sequence 2:	NP_190949.1	Gene:	AT3G53810 / 824548	AraportID:	AT3G53810	Length:	677	Species:	Arabidopsis thaliana

Alignment Length:	338	Identity:	86/338 - (25%)
Similarity:	145/338 - (42%)	Gaps:	91/338 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   457 EANCDRW--EFPRYRLKF------------FNILGEGAFGQVWRCEATNINGNEGI--TT---VA 502
            |...|.|  ||.:.|.:|            .::||.|.||:|:|          ||  ||   ||
plant   320 EEELDDWETEFGKNRFRFKELYHATKGFKEKDLLGSGGFGRVYR----------GILPTTKLEVA 374

  Fly   503 VKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSR 567
            ||.:...:.: ..|:.::|:..:..:. |.|:|.|||.|..:....::.:|:..|.|..||
plant   375 VKRVSHDSKQ-GMKEFVAEIVSIGRMS-HRNLVPLLGYCRRRGELLLVYDYMPNGSLDKYL---- 433

  Fly   568 AERHYGNTHGKSNVLTSCD---LTSFMYQVAKGMDYL---TSRGIIHRDLAARNILITDDHTCKV 626
                |.|..      |:.|   .::.:..||.|:.||   ..:.:||||:.|.|:|:..|...::
plant   434 ----YNNPE------TTLDWKQRSTIIKGVASGLFYLHEEWEQVVIHRDVKASNVLLDADFNGRL 488

  Fly   627 ADFGFARDVITSKIYERKSEGKL-----PIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGST 686
            .|||.||      :|:..|:.:.     .:.::|.|.......:..:|:::||..:.|:|: |..
plant   489 GDFGLAR------LYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVYAFGAFLLEVVS-GRR 546

  Fly   687 PYPGISAAD-----------------VMRKVRD------GYRLEKPEHCRRELYNIMYYCWSHDP 728
            |....||:|                 :| :.:|      ||.||:.|    .:..:...|...||
plant   547 PIEFHSASDDTFLLVEWVFSLWLRGNIM-EAKDPKLGSSGYDLEEVE----MVLKLGLLCSHSDP 606

  Fly   729 QERPLFAEIIQML 741
            :.||...:::|.|
plant   607 RARPSMRQVLQYL 619

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cad96Ca	NP_651349.1	Cadherin_repeat	65..164	CDD:206637
		STYKc	470..741	CDD:214568	79/321 (25%)
		PTKc	474..742	CDD:270623	79/307 (26%)
AT3G53810	NP_190949.1	Lectin_legB	25..276	CDD:278564
		STYKc	348..619	CDD:214568	78/308 (25%)
		STKc_IRAK	353..619	CDD:270968	78/303 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000