DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and fgfr3

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:XP_021336328.1 Gene:fgfr3 / 58129 ZFINID:ZDB-GENE-000816-1 Length:821 Species:Danio rerio


Alignment Length:872 Identity:240/872 - (27%)
Similarity:367/872 - (42%) Gaps:246/872 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LTIIVVTATVVSLISQEAEAHNQNAPPI-----LYVRERNWRISETEKVGQIIDRVRAED---PD 85
            |.:::..||:|             .||:     |.....:|..||.|        |..||   ..
Zfish    23 LCLLLYLATLV-------------FPPVYSAHLLSPEPTDWVSSEVE--------VFLEDYVAGV 66

  Fly    86 GDDLIFGIEPR-FSLPGGENDASPPEKIPFQIDRETGVVTLNESLAGRAGQNFLIYITVTD---- 145
            ||.::....|: |.||           |.:|.|.:    .::.|...|.||..|..|.|:.    
Zfish    67 GDTVVLSCTPQDFLLP-----------IVWQKDGD----AVSSSNRTRVGQKALRIINVSYEDSG 116

  Fly   146 -------------GSYTAK---------NEVFINILGERENSSGYRPQTSISNVVHNISQFLPRF 188
                         .:||.|         :|.:.....|..|.:...|..:.|:.:......:|..
Zfish   117 VYSCRHAHKSMLLSNYTVKVIDSLSSGDDEDYDEDEDEAGNGNAEAPYWTRSDRMEKKLLAVPAA 181

  Fly   189 DQL-----------PGVQSIRNG--------------------------LPNSRPGGWYPPVPQN 216
            :.:           |.:..::||                          :|:.|  |.|..|.||
Zfish   182 NTVKFRCPAAGNPTPSIHWLKNGKEFKGEQRMGGIKLRDQQWSLVMESAVPSDR--GNYTCVVQN 244

  Fly   217 NI----------------------FGPPP-----FGNN-------YPPPPPNIP-----GVRGEQ 242
            ..                      .|.|.     .|::       |....|:|.     .|.|.|
Zfish   245 KYGTIKHTYQLDVLERSPHRPILQAGLPANQTVVVGSDVEFHCKVYSDAQPHIQWLKHIEVNGSQ 309

  Fly   243 SGEEEQPDEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAIPAETTTPSGGH--HNNSSSP 305
            .|....|...|..|..:   :||.|....|      ..|.|......:.|..:|..  :|:.|:.
Zfish   310 YGPNGAPYVNVLKTAGI---NTTDKELEIL------YLTNVSFEDAGQYTCLAGNSIGYNHHSAW 365

  Fly   306 ITIFSLKS-------GTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKT---KEKEELAKK 360
            :|:.....       ..|.|.||....|:...|::.      ||.:....:||   ...::|:|.
Zfish   366 LTVLPAVEMEREDDYADILIYVTSCVLFILTMVIII------LCRMWINTQKTLPAPPVQKLSKF 424

  Fly   361 SNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPS 425
            ..:.|::.:|  :|.:||            |...|..|     ||....|.|.....||...:||
Zfish   425 PLKRQVTVSL--ESNSSM------------NSNTPLVR-----IARLSSSDGPMLPNVSELELPS 470

  Fly   426 PGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEAT 490
                :|                              :|||.|.:|.....||||.||||...||.
Zfish   471 ----DP------------------------------KWEFTRTKLTLGKPLGEGCFGQVVMAEAI 501

  Fly   491 NIN---GNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILE 552
            .|:   .|:.: |||||.||:..|:.|..||:||:|:||.:..|.|:::|||.||...|.:|::|
Zfish   502 GIDKEKPNKPL-TVAVKMLKDDGTDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVE 565

  Fly   553 YVNRGKLQTYLRSSR---AERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAAR 614
            |.::|.|:.|||:.|   .:..:......:..||..||.|..||||:||:||.|:..||||||||
Zfish   566 YASKGNLREYLRARRPPGMDYSFDTCKIPNETLTFKDLVSCAYQVARGMEYLASKKCIHRDLAAR 630

  Fly   615 NILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWE 679
            |:|:|:|:..|:||||.||||.....|::.:.|:||::|||.|:|:|.:::.:||:||:|:|:||
Zfish   631 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSYGVLLWE 695

  Fly   680 IVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKL 744
            |.|||.:|||||...::.:.:::|:|::||.:|..|||.||..||...|.:||.|.::::..|::
Zfish   696 IFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFRQLVEDHDRV 760

  Fly   745 LH-TEMD-YIEL----ERF----PDHN 761
            |. |..| |::|    |::    ||.|
Zfish   761 LSMTSTDEYLDLSVPFEQYSPTCPDSN 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 27/128 (21%)
STYKc 470..741 CDD:214568 124/276 (45%)
PTKc 474..742 CDD:270623 123/273 (45%)
fgfr3XP_021336328.1 IGc2 67..121 CDD:197706 16/68 (24%)
Ig2_FGFR 173..257 CDD:143265 11/85 (13%)
Ig3_FGFR-2 280..369 CDD:143266 22/97 (23%)
PTKc_FGFR3 468..801 CDD:173652 141/355 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.770

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