DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and fgfr1b

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001155204.1 Gene:fgfr1b / 567905 ZFINID:ZDB-GENE-060503-14 Length:740 Species:Danio rerio


Alignment Length:842 Identity:237/842 - (28%)
Similarity:371/842 - (44%) Gaps:239/842 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KQLTSWRRRSLLLTIIVVT--ATVVSLISQEAEAHNQNAPPILYVRERNWRISETEKVGQIIDRV 79
            :.|.|||   ||:.::::|  .||            |:.|.:            ||: |.|:  .
Zfish    11 RMLKSWR---LLVLLLILTQLCTV------------QSRPAV------------TEQ-GHIV--A 45

  Fly    80 RAEDPDGDDL------------IFGIEPRFSLPGG------------------ENDASPPEKI-- 112
            .:||.|.|:.            :..:.||::.|..                  :.:.:|..|:  
Zfish    46 SSEDEDDDESSSEENKPSSSQELLPMAPRWAQPEKMEKKLHAVPASKTVKFRCQAEGNPIPKLRW 110

  Fly   113 -----PFQIDRETGVVTLNESLAGRAGQNFLIYITVT---DGSYTAKNEVFINILGERENSSGYR 169
                 .|:.|:..|...|.|.:.      .:|..:|.   .|:||..          .||..|..
Zfish   111 LKNGKEFKRDQRIGGYKLREHMW------TIIMESVVPSDKGNYTCL----------VENEYGSI 159

  Fly   170 PQTSISNVVHNISQFLPRFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFGPPPFGNN------- 227
            ..|...:||          ::.|....:..|||.:|..               ..|::       
Zfish   160 NHTYQLDVV----------ERSPHRPILYAGLPANRTA---------------VVGSDVEFVCKV 199

  Fly   228 YPPPPPNIP-----GVRGEQSGEEEQPDEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAI 287
            :..|.|:|.     .|.|.|.|.:..|...|..|..:   :||.|.    ..:....:...|.| 
Zfish   200 FSDPQPHIQWLKHIRVNGSQLGPDGLPYVRVLKTAGL---NTTDKE----MEVLQLRNVSFEDA- 256

  Fly   288 PAETTTPSG-----GHHNNSSSPITIFSLKSGTIP-----------IVVTVGGFFVAIAVLLAYL 336
             .|.|..:|     .||   |:.:|:  :|:.|.|           ::..:|.|.:.:.|.:|  
Zfish   257 -GEYTCLAGNSIGISHH---SAWLTV--VKAPTAPSAVPSQSYLEVLIYCIGFFLIFLMVGIA-- 313

  Fly   337 CRRRLCAISRTLKKTKEKEELAKKSN-QSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQ 400
                      |:.|.:..   :|||: .|||:                   |....:.:|..|..
Zfish   314 ----------TIVKIRSS---SKKSDFNSQLA-------------------VHKLAKSIPLRRQI 346

  Fly   401 QMGI-ATSQLSTG---VTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCD 461
            .:.: ::|.|::|   |....:||.|.|               :..|......|::.      | 
Zfish   347 TVSVESSSSLNSGVMLVRPSRLSSSGTP---------------MLSGVSEYELPQDP------C- 389

  Fly   462 RWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNE--GITTVAVKTLKESATEVDRKDLLSELEV 524
             ||..|.||.....||||.||||...||..::.::  .||.||||.||..|||.|..||:||:|:
Zfish   390 -WEVSRERLVLGKPLGEGCFGQVVMGEAIGLDKDKPNRITKVAVKMLKSDATEKDLSDLISEMEM 453

  Fly   525 MKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGKS---------- 579
            ||.:..|.|:::|||.||...|.:||:|:.::|.|:.|||:.|       .||..          
Zfish   454 MKMIGKHKNIINLLGACTQDGPLYVIVEFASKGNLREYLRARR-------PHGMEYCYNPDPLPI 511

  Fly   580 NVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERK 644
            ..::..||.|..||||:||:||.|:..|||||||||:|:|:|:..|:||||.||||.....|::.
Zfish   512 ESMSIKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDVHHIDYYKKT 576

  Fly   645 SEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKP 709
            :.|:||::|||.|:|:|.|::.:||:||||:|:|||.|||.:||||:...::.:.:|:|:|::||
Zfish   577 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLREGHRMDKP 641

  Fly   710 EHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLLH--TEMDYIELERFPDHNYYNIVSLS 769
            ..|.:|||.:|..||...|.:||.|.::::.||:.|.  :..:|:||. .|....|:.|.|:
Zfish   642 SACTQELYLMMKDCWHAVPTQRPTFKQLVEDLDRTLSLISNQEYLELS-VPLEPMYSQVILN 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 23/138 (17%)
STYKc 470..741 CDD:214568 126/282 (45%)
PTKc 474..742 CDD:270623 125/279 (45%)
fgfr1bNP_001155204.1 I-set 80..167 CDD:254352 16/102 (16%)
Ig2_FGFR 83..167 CDD:143265 16/99 (16%)
IG_like 182..278 CDD:214653 24/122 (20%)
Ig3_FGFR-2 190..278 CDD:143266 22/99 (22%)
PKc_like 383..684 CDD:304357 135/315 (43%)
Pkinase_Tyr 397..673 CDD:285015 126/282 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.770

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