DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and drl

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster


Alignment Length:679 Identity:158/679 - (23%)
Similarity:256/679 - (37%) Gaps:200/679 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 NVVHNISQFLPRFDQLPGVQS----IRNGLPNSRPGGWYPPVP----------QNNIFGPPPFGN 226
            |:..|:.:.|    :|.||.:    :|.|..|.....:..|||          |:.:..|.|:..
  Fly    23 NIFLNLHEVL----RLIGVSAELYYVREGAINDYALNFAVPVPANISDVTFTWQSLVDHPLPYSI 83

  Fly   227 N--------YPPPPPNIP------------GVRGEQSGEEEQPDEEVTPTTPVR-ISSTTPKSRT 270
            |        .|.|..||.            |:..:.||..   :.|||.|..|. |......:.|
  Fly    84 NIATSDTEVLPRPILNISRIGDVPVEPQTWGIALKCSGTR---NAEVTVTINVEVILDRATNNNT 145

  Fly   271 KL----------------------------------------------TPITANNSTRVESAIPA 289
            .|                                              ..:.||.....|...|.
  Fly   146 NLIFKRKKICLREEQDSAHEEYDDDDLDLLQTARKGHGGDIHYVDRNDEHVVANGHQAPEKQRPV 210

  Fly   290 ETTTPSGGHHNNSSSPITIFSLKSGTIP-----IVVTVGGF----FVAIAVLLAYLCRRRLCAIS 345
            .|.:|.|..::..|.......|:...:|     :.:.|||.    .|:..:|:||      ||..
  Fly   211 VTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLIVGGILALVLVSTLILIAY------CAKG 269

  Fly   346 RTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLS 410
            .:.:.......|.|.|:..:| .|::..:.||:              ||                
  Fly   270 PSKRHPSNGVHLIKTSSFQRL-PTISSTAHNSI--------------YV---------------- 303

  Fly   411 TGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPR-------- 467
                                     .|..:|....:...|...:..|..    ||.|        
  Fly   304 -------------------------CPSTITPTYATLTRPFREYEHEPE----EFNRRLQELTVQ 339

  Fly   468 -YRLKFFNILGEGAFGQVWR-----CEATNINGNEGITTVAVKTLKESATEVDRKDLLSELEVMK 526
             .|::...::.||.||:::|     |:           .|.|||:.:.|:::....||.| .:|.
  Fly   340 KCRVRLSCLVQEGNFGRIYRGTYNDCQ-----------EVLVKTVAQHASQLQVNLLLQE-SMML 392

  Fly   527 SLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGKSNVLTSCDLTSFM 591
            ....|.||:.:||...:...|..:| |...|.::. |:|...:..|..:      :|:.......
  Fly   393 YEASHPNVLSVLGISIEDYATPFVL-YAATGSVRN-LKSFLQDPSYARS------VTTIQTVLMG 449

  Fly   592 YQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKL-PIRWMA 655
            .|:|..|::|.:.|:||:|:||||.:|.|....|:.|...:||:.... |....:|:. ||:|::
  Fly   450 SQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSRDLFPGD-YNSLGDGEYRPIKWLS 513

  Fly   656 TESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIM 720
            .|:|..:.::..||:||||:||||:.|||..||..|...::...::|||||.:|.:|..||:.||
  Fly   514 LEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIM 578

  Fly   721 YYCWSHDPQERPLFAEIIQMLDKLLHTEM 749
            .|||:..|.|||.|:: :|:.....||::
  Fly   579 AYCWASMPAERPSFSQ-LQICLSEFHTQI 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 89/276 (32%)
PTKc 474..742 CDD:270623 89/273 (33%)
drlNP_001260566.1 WIF 21..157 CDD:128745 31/140 (22%)
PTK_Ryk 336..606 CDD:270639 92/291 (32%)
Pkinase_Tyr 343..599 CDD:285015 89/277 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455360
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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