DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and htl

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster


Alignment Length:849 Identity:235/849 - (27%)
Similarity:343/849 - (40%) Gaps:266/849 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SWRRRSLLLTI----IVVTATVVS-------------------LISQEAEAHNQNAPPILYVRER 62
            |||.....:|:    :||...::|                   :|.....|.:||..|.:   ..
  Fly     6 SWRASHSTITMTSGSLVVLFLLLSIWQPAVQVEGRRQMANSQEMIKDHLGARSQNKTPAI---TN 67

  Fly    63 NWRISETEKVGQIIDRVRAEDPDGD-DLIFGIEPRFSLPGGENDASPPEKIPFQIDRETG-VVTL 125
            |...|.|....  :|...|:|.|.. ||...:.   |.|...|    |:|:.|...|.:| ::||
  Fly    68 NANQSSTSSAD--LDDGAADDDDNKADLPVNVS---SKPYWRN----PKKMSFLQTRPSGSLLTL 123

  Fly   126 NESLAGRAGQNFLIY--------------------ITVTD------GSYTAKNEVFINILG---- 160
            |....|....|...|                    :|:.|      |:||.|   ..|.||    
  Fly   124 NCHALGNPEPNITWYRNGTVDWTRGYGSLKRNRWTLTMEDLVPGDCGNYTCK---VCNSLGCIRH 185

  Fly   161 -------ER-----------------ENSSG-----------------YRPQTSISNVVHNISQF 184
                   :|                 .||:|                 :.|...::|..:|.|..
  Fly   186 DTQVIVSDRVNHKPILMTGPLNLTLVVNSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSII 250

  Fly   185 LPRFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFGPPPFGNNYPPPPPNIPGVRGEQSGEEEQP 249
            ....|||..| ::|     ....|||..|..|::                     |:.:.     
  Fly   251 AEDKDQLDFV-NVR-----MEQEGWYTCVESNSL---------------------GQSNS----- 283

  Fly   250 DEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKSG 314
                  |..:|:                     |.|....|....||..|:.|...|.:|.    
  Fly   284 ------TAYLRV---------------------VRSLHVLEAGVASGSLHSTSFVYIFVFG---- 317

  Fly   315 TIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKE------KEELAKKSNQSQLSSTLTDD 373
                    |..|:.:..|..:...|:: ...:.||:..|      |:.:..|......||    .
  Fly   318 --------GLIFIFMTTLFVFYAIRKM-KHEKVLKQRIETVHQWTKKVIIFKPEGGGDSS----G 369

  Fly   374 SRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPG 438
            |.::|:|              |..|.|:      |.:|.:.||            .||       
  Fly   370 SMDTMIM--------------PVVRIQK------QRTTVLQNG------------NEP------- 395

  Fly   439 CLTGGAGSSGAPENAFAGEANCD-RWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVA 502
                      ||.|.:  |...| .||.||..|.....|||||||:|...|..|       ..||
  Fly   396 ----------APFNEY--EFPLDSNWELPRSHLVLGATLGEGAFGRVVMAEVNN-------AIVA 441

  Fly   503 VKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSR 567
            ||.:||..|:.|...|:.|:||||.:..|||:::|||||:...|.:||:||...|.|:.:|..:|
  Fly   442 VKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNR 506

  Fly   568 AERHYGNTHGK----------SNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDH 622
            .   :|....:          ::|:|..||..|.:|:|:|||||.||..|||||||||:|::||:
  Fly   507 P---FGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDY 568

  Fly   623 TCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTP 687
            ..|:||||.|||:.::..|.:.:.|:|||:|||.|||.:..:..|||:||:|||:|||:|.|..|
  Fly   569 VLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQP 633

  Fly   688 YPGI-SAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEMDY 751
            ||.| ||.::...:..|.|:|||..|...:|.:|..||..:..:||.|.||::.:||||.|:.||
  Fly   634 YPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKEDY 698

  Fly   752 IELE 755
            ::::
  Fly   699 LDVD 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 32/154 (21%)
STYKc 470..741 CDD:214568 122/281 (43%)
PTKc 474..742 CDD:270623 121/278 (44%)
htlNP_524394.2 Ig 112..191 CDD:299845 17/81 (21%)
IG_like 113..191 CDD:214653 17/80 (21%)
IG_like 205..289 CDD:214653 19/121 (16%)
PKc_like 404..692 CDD:304357 129/297 (43%)
STYKc 416..688 CDD:214568 122/281 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455241
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 1 0.900 - - E1_KOG0200
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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