DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and Tie

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster


Alignment Length:628 Identity:175/628 - (27%)
Similarity:276/628 - (43%) Gaps:153/628 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 VTPTTPVRISSTTPKS-----RTKLT---------PITANNSTRVESAIPAETTTPSGG------ 297
            |||.|..:.|.||..|     .|.||         |.:.:.:|...:..|...|.||..      
  Fly   632 VTPRTQTQPSHTTDSSPKILRTTVLTSIRSTVHPRPTSTSTTTSTTTTAPPAVTAPSNEVYIGIV 696

  Fly   298 HHNNSSSPITIFS------------LKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKK 350
            ..::|:||..|.|            ::...:..:|.|....:.:|.::.||.|.  ..|.|..|:
  Fly   697 ESSSSASPADISSTVIANERDLNMEMRRMNLVTLVLVAVGVIPLAAIILYLVRN--FVIRRRAKQ 759

  Fly   351 TK-------EKEELA--KKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIAT 406
            ::       :::.::  ||.:    |....||..:.:..|..|......|............:..
  Fly   760 SEVFDVCITDQQPISPVKKVD----SKYQVDDDEDEVDHQHHQHMQHHQNHQNHQNHQHHQAMPM 820

  Fly   407 SQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLK 471
            ||.|....|            ....|:|              ..:.:.|.|.:    :|.|..::
  Fly   821 SQASQRDAN------------HNRYGNN--------------DDKTSLASEFH----DFERSNIR 855

  Fly   472 FFNILGEGAFGQVWRCEATNINGNEGIT-TVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVV 535
            ..::||||.|||||:.||.:::|:.|.| .|||||::..:.:|..||   |..:|:.|..|.|||
  Fly   856 LKSLLGEGNFGQVWKAEADDLSGHFGATRIVAVKTIRACSAQVSLKD---EANIMRKLGSHQNVV 917

  Fly   536 HLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHY--GNTHGKSNV--LTSCDLTSFMYQVAK 596
            .|||.|.:.:|..:|:||..||:|.:.||::|:..:.  .:..|..::  |:...|..|...:|.
  Fly   918 TLLGACVESEPHMLIMEYAMRGRLLSLLRAARSATNILPASVPGGRSLAPLSPRTLAGFALDIAC 982

  Fly   597 GMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIY-------------------- 641
            ||:|:..|.|:||||||||:|:..:..||:.|||.:.|:...::.                    
  Fly   983 GMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDLDAERMRKEQEKNAANDLMRHNAHKFK 1047

  Fly   642 --------------------------------ERKSE------GK---LPIRWMATESLYDNIFS 665
                                            |:||.      ||   |||||||.|||..::|:
  Fly  1048 FDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRHALPIRWMAPESLQYHMFT 1112

  Fly   666 VKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQE 730
            .::|||:|||::|||.|||||||..::..:|:|:|..|.|.:.|:..|.|.||:|..||..:|..
  Fly  1113 TETDIWAFGIVLWEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKESRHEFYNLMSRCWHKEPHM 1177

  Fly   731 RPLFA----EIIQMLDKLLHTE---MDYIELERFPDHNYYNIV 766
            ||.||    ||.:.|.|.:..:   .||:::..|.:...:.:|
  Fly  1178 RPSFAQSRLEITRSLHKWVDDDSAASDYMDVSGFSEDLEHGVV 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 120/340 (35%)
PTKc 474..742 CDD:270623 120/337 (36%)
TieNP_523928.1 TyrKc 854..1183 CDD:197581 117/331 (35%)
PTKc 860..1187 CDD:270623 118/329 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455322
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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