DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and Drl-2

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001286371.1 Gene:Drl-2 / 36436 FlyBaseID:FBgn0033791 Length:648 Species:Drosophila melanogaster


Alignment Length:684 Identity:148/684 - (21%)
Similarity:261/684 - (38%) Gaps:166/684 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 TSISNVVHNISQFLPRFD--QLPGVQS----IRNGLPNSRPGGWYPPVP----------QNNIFG 220
            ||:|..: ||  |:...:  :|.|:::    :..|..|:....:..|||          |:.|..
  Fly    21 TSVSGYL-NI--FISHHEVMKLMGLEADLFYVHEGAINTYAMHFTVPVPADVHELEFSWQSLIAY 82

  Fly   221 PPPFGNNYPPPPPNIPGVRGEQSGEEEQPDEEV--TPTTPVRISSTTP---KSRTKLTPITAN-- 278
            |.|:..:.                 |...|:|.  |||..:......|   :|.....|.|.|  
  Fly    83 PLPYAISI-----------------EYNNDQEALGTPTLSIPHKGLVPQEIESFLVYLPCTGNAS 130

  Fly   279 -----------------NSTRVE-----------SAIPAETTTPSGGHHNNSSSPITIFSLKSGT 315
                             |.||:.           |..|.::..|:   |..|..| .:.|..:..
  Fly   131 LQMPVNVNMVVRAPPRFNDTRLHFKRNKICAKGISPEPNQSPAPA---HAPSQGP-ALLSAAACA 191

  Fly   316 IPIVVTVGGFFVAIAVLLAYLCRR------------------------RLCAISRTLKKTKEKEE 356
            :.:|:.||    .:|.::....|:                        ||..:.|....|.....
  Fly   192 LGLVLAVG----LVASMMYVRARKQLRQDSLHTSFTTAAYGSHQNVFIRLDPLGRPPSATGSYAT 252

  Fly   357 LA---KKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMG--------------- 403
            :|   |....|:.|.::.|..|:|..      |..:|...:|...:|...               
  Fly   253 IASLNKYPADSKKSCSIFDRFRSSPT------PTPYATALLPMNLEQTAETIYSKPESICPSRIS 311

  Fly   404 -IATSQLSTGVTNGGVSSP-GVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDR---- 462
             .|:|||:...:   :|:| .:.|.|.|...|..|...|.||..:......|..||....|    
  Fly   312 YYASSQLTQPCS---LSTPKSIRSNGNGNCTSGSGSLSLFGGIPTGSTITMASHGEKGNQRLRRI 373

  Fly   463 WEFPRYRLKFFNILGEGAFGQVW------RCEATNINGNEGITTVAVKTLKESATEVDRKDLLSE 521
            .......|.:..::.||.||:::      .|||            .|||:.:.|:......||.:
  Fly   374 TSVQPGALSYEELVKEGTFGRIYAGKLGESCEA------------LVKTVIDGASLTQVACLLQD 426

  Fly   522 LEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGKSNVLTSCD 586
            ..::..:.....:..||.......|..:...:.::|.|:.||:.||.         .|..|::..
  Fly   427 ASLLIGVSHQHILAPLLANTELPGPPEIAYPHPSKGNLKMYLQKSRE---------SSTALSTRQ 482

  Fly   587 LTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGK-LP 650
            |..|...:.||:.||.|.||:|:|:|.||..:.::...|:.|...:||:.... |:...:.: .|
  Fly   483 LVEFGLHITKGLAYLHSLGIVHKDIATRNCYLDEESYVKICDSALSRDLFPDD-YDCLGDNENRP 546

  Fly   651 IRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRE 715
            ::|::.|||...:::.:.|:|:.|:..||:|||...|:..:...::...:..|:|||:|.:|..|
  Fly   547 LKWLSLESLQKRVYATQGDVWALGVTYWELVTLAQMPHEEVDIFELTNYLAAGFRLEQPVNCPDE 611

  Fly   716 LYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEM 749
            .:.:|..||..:.::||..::::..|.. .|.::
  Fly   612 FFTVMNCCWHCEAKQRPTPSQLLSYLQD-FHADL 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 70/277 (25%)
PTKc 474..742 CDD:270623 69/274 (25%)
Drl-2NP_001286371.1 WIF 37..156 CDD:280237 25/135 (19%)
PTK_Ryk 373..644 CDD:270639 72/293 (25%)
STYKc 389..637 CDD:214568 69/269 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.