DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and tor

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster


Alignment Length:900 Identity:191/900 - (21%)
Similarity:301/900 - (33%) Gaps:359/900 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KIPFQID------------RETGVVTLN-------ESLAGRAGQNFLIY----------ITVT-- 144
            :|.||||            ..|.::.::       |:....:..||||.          ||..  
  Fly    88 EIVFQIDWVQHSRGTEPAPNATYIIRVDAVKDDNKETALYLSDDNFLILPGLESNSTHNITALAM 152

  Fly   145 --DGSYT--AKNEVFINILGERENSSGYRPQTSISNVVHNISQFLPRFDQLPGVQSIRNGLPNSR 205
              ||||:  ||::.|..::      .||:|  |....| |:.:|:|:.|.|..:.:...      
  Fly   153 HGDGSYSLIAKDQTFATLI------RGYQP--SKMGAV-NLLRFVPQPDDLHHIAAEIE------ 202

  Fly   206 PGGWYPPVPQNNIFGPPPFGNN------------------YPPPPPNIP-------GVRGEQSGE 245
               |.|....|..|....:..|                  |.....|:.       |||......
  Fly   203 ---WKPSAESNCYFDMVSYSTNSVNMDEPLEVQFRDRKKLYRHTVDNLEFDKQYHVGVRTVNIMN 264

  Fly   246 EEQPDEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESA----IPAETTTPSGGHHNNSSSPI 306
            ..:.|.:..|..........|.:.|...|....|.|..:..    |.|...|.:...:...:..:
  Fly   265 RLESDLQWLPIAVPSCLDWYPYNYTLCPPHKPENLTVTQKQYLPNILALNITWARPRYLPDNYTL 329

  Fly   307 TIFSL-KSGT--------------IPIVVTVGGFF------------------------------ 326
            .||.| |.||              :|.:..:|..|                              
  Fly   330 HIFDLFKGGTELNYTLDQNRSHFYVPKITVLGSHFEVHLVAQSAGGKNVSGLTLDKVHRGVLLSE 394

  Fly   327 -----VAIAVLLAYLCRRRLCAISRTLKKTKEKEEL---AKKSNQSQLSSTLTDDSRNSMVMQQW 383
                 :.:.:::...|...||:::...:...|.:.|   ||.:..|:...:|.|           
  Fly   395 GNMVKLVLFIIVPICCILMLCSLTFCRRNRSEVQALQMDAKDAKASEFHLSLMD----------- 448

  Fly   384 QGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSG 448
                                                                          |||
  Fly   449 --------------------------------------------------------------SSG 451

  Fly   449 APENAFAGEA--NCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGI---TTVAVKTLKE 508
            ......|.|:  ..|..|...:.:...::|||||||.|.|          |:   ..||||.||:
  Fly   452 LLVTLSANESLEVMDELEVEPHSVLLQDVLGEGAFGLVRR----------GVYKKRQVAVKLLKD 506

  Fly   509 SATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTD-KDPTFVILEYVNRGKLQTYLR-------- 564
            ...:.|......|::::|::..|.|:|.::|..|. .:...:::||.:.|.||.:||        
  Fly   507 EPNDEDVYAFKCEIQMLKAVGKHPNIVGIVGYSTRFSNQMMLLIEYCSLGSLQNFLREEWKFRQE 571

  Fly   565 ----------------------------------------------------SSRAERH------ 571
                                                                |||.|.:      
  Fly   572 QNAIGLKKNLEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLTRIT 636

  Fly   572 -------YG---------------------------------------NTHGKSNV--------- 581
                   ||                                       .:..|..:         
  Fly   637 NAADNKGYGLEDIENIGGSYIPKTAEAPKDRPKRKLKPQPKKDSKQDFKSDNKKRIFENKEYFDC 701

  Fly   582 -----------LTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDV 635
                       |...||.....|||.||::|....::||||||||:||:.|.:.|:||||.:|||
  Fly   702 LDSSDTKPRIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLISVDRSIKIADFGLSRDV 766

  Fly   636 ITSKIYERKS--EGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMR 698
            ....:| |||  .|||||:|:|.|||...:::.:||:||||:|::||.|||..|||.:|.:|:::
  Fly   767 YHENVY-RKSGGSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVSPSDLLQ 830

  Fly   699 KVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEMDYIE 753
            .:|.|:|:::||.|.:|::::|..|||..|..||.|:.:...|..::....|..|
  Fly   831 LLRQGHRMKRPEGCTQEMFSLMESCWSSVPSHRPTFSALKHRLGGMILATNDVPE 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 20/87 (23%)
STYKc 470..741 CDD:214568 112/408 (27%)
PTKc 474..742 CDD:270623 112/405 (28%)
torNP_476762.1 FN3 199..261 CDD:214495 10/70 (14%)
STYKc 475..873 CDD:214568 112/408 (27%)
PTKc 479..873 CDD:270623 112/404 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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