DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and Y50D4B.6

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_503375.2 Gene:Y50D4B.6 / 3565593 WormBaseID:WBGene00021745 Length:421 Species:Caenorhabditis elegans


Alignment Length:363 Identity:117/363 - (32%)
Similarity:177/363 - (48%) Gaps:30/363 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 TSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCD-RWEFPRYR 469
            |..|.:|:.:.  ||...|| ...|..|.|.........|....|.||.......| |:|....:
 Worm    39 TRSLESGIIHS--SSQKTPS-SVRENESLLQANEENVPIGLETEPINAIIKNLKFDERFEIDVNK 100

  Fly   470 LKFFNI--LGEGAFGQVW--RCEATNING--NEGITTVAVKTLKESATEVDRKDLLSELEVMKSL 528
            ..|:|:  ||.|.:|:|:  |......||  :|....||||.........:::.:..||.||..:
 Worm   101 FSFYNLSFLGNGYYGKVFKERMHKKQKNGLDSENSLEVAVKRALRPEDPSEQQLMCEELNVMCVV 165

  Fly   529 EPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGN-----THGKSNVLTSCDLT 588
            ..|.|::.|:......: ..::.|:|.:|.|..||   ||.|.|.|     ......:|...||.
 Worm   166 GKHPNILALIRWIRTNE-ILIVSEFVEKGDLVEYL---RARRRYFNKDIVCVEDNGRLLCPTDLL 226

  Fly   589 SFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRW 653
            ||.:|:|.||.:|.:...:|||||.||:.:..:...::||||.||.....:.|.:|::...|::|
 Worm   227 SFAFQIANGMKFLGNVACVHRDLALRNVFVKRNRIIRIADFGLARWHENKEYYRKKTDVGFPMKW 291

  Fly   654 MATESL-----YDNI-FSVKSDIWSFGILMWEIVTLGSTPYPGIS-----AADVMRKVRDGYRLE 707
            :|.|..     .:|| |..||||||:|:.::||.:||.:||.|:.     ...:|:.||||.:|.
 Worm   292 LAPECFEFEQERENIKFDSKSDIWSYGVCLYEIFSLGVSPYEGLDFRPDYFQGLMKYVRDGNQLP 356

  Fly   708 KPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLL 745
            .|||...::|..|..||:.:|.:||:|:|......|||
 Worm   357 SPEHGSDKIYEFMQSCWNLNPDKRPVFSECRDFFQKLL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 97/292 (33%)
PTKc 474..742 CDD:270623 96/289 (33%)
Y50D4B.6NP_503375.2 PTKc 109..391 CDD:270623 95/285 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157450
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4350
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.790

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