DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and CG3277

DIOPT Version :10

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster


Alignment Length:621 Identity:169/621 - (27%)
Similarity:261/621 - (42%) Gaps:188/621 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 NYPPPPPNIPGVR----GEQSGEEEQPDEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAI 287
            |:...|....||.    |.|..|:.....:.....|.....  |:|.||: |:.||         
  Fly   281 NFRATPKGFEGVMKLGLGTQLKEKASLSLQAVIIDPTGCEG--PRSVTKV-PVPAN--------- 333

  Fly   288 PAETTTPSGGHHNNSSSPITIFSLKSGTIPIVVTVGGFFVAI--AVLLAYLCRRRLCAISRTLKK 350
            |...|  .|...:||                ::.:....:||  |.|:..|.|||.   :||..|
  Fly   334 PVLLT--EGDSVSNS----------------IIVMSAMLIAIILAGLIMLLLRRRR---ARTTAK 377

  Fly   351 TKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTN 415
            .:::|::   ..|:..:|.:           :.:..|.:.::||  |:.|.:|:|          
  Fly   378 LRKQEQI---YIQTFATSAI-----------EMEDNVNYVDKYV--EKSQVLGLA---------- 416

  Fly   416 GGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGA 480
                                                         |.:|.|...::...:|||||
  Fly   417 ---------------------------------------------DIFEVPHSAIQIGRMLGEGA 436

  Fly   481 FGQVWRCEATNINGNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKD 545
            ||||....|.|:....|.|.||||.||.:....:..:.|:|:|::|.:..|.|||..|||||.|.
  Fly   437 FGQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCTIKP 501

  Fly   546 PTFVILEYVNRGKLQTYLRSSRAE-------------------RHYGNTHGKSN----------- 580
            |..:|:||||:|.|.:|||:.|.|                   |....:..||.           
  Fly   502 PYLMIMEYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRPIMTRTNSTSSPKSQSVNYIELKASS 566

  Fly   581 ----------------------------------------VLTSCDLTSFMYQVAKGMDYLTSRG 605
                                                    :|.:.:|.:|..|:|.||.:|..:.
  Fly   567 QTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQIANGMRFLEEQE 631

  Fly   606 IIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDI 670
            |.||||||||:||..:.|.|::|||.:|    ..||......|||:||::.|::.:|::|.||||
  Fly   632 ITHRDLAARNVLIDSNKTLKISDFGLSR----HGIYTNTRTRKLPLRWLSIEAIRENVYSSKSDI 692

  Fly   671 WSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFA 735
            |::|:::|||.|||::|||.||..:::..:..|.|||:||.|..::|.||..||..:|:|||.| 
  Fly   693 WAYGVVLWEIGTLGASPYPTISNDELIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPEERPTF- 756

  Fly   736 EIIQMLDKLLHTEMDYIELERFPDHNYYNIVSLSGE 771
               ..|.|:|..:..|:::....|...:..:|.:.|
  Fly   757 ---DALYKVLSPKTTYVDINSLSDDYVFPPISENRE 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
PTKc 474..742 CDD:270623 118/337 (35%)
CG3277NP_608762.3 PTKc 430..763 CDD:270623 120/340 (35%)
Blue background indicates that the domain is not in the aligned region.

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