DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and CG3277

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster


Alignment Length:621 Identity:170/621 - (27%)
Similarity:264/621 - (42%) Gaps:188/621 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 NYPPPPPNIPGVRGEQSGEEEQPDEEVTPTTPVRISSTT----PKSRTKLTPITANNSTRVESAI 287
            |:...|....||.  :.|...|..|:.:.:....|...|    |:|.||: |:.||         
  Fly   281 NFRATPKGFEGVM--KLGLGTQLKEKASLSLQAVIIDPTGCEGPRSVTKV-PVPAN--------- 333

  Fly   288 PAETTTPSGGHHNNSSSPITIFSLKSGTIPIVVTVGGFFVAI--AVLLAYLCRRRLCAISRTLKK 350
            |...|  .|...:||                ::.:....:||  |.|:..|.|||.   :||..|
  Fly   334 PVLLT--EGDSVSNS----------------IIVMSAMLIAIILAGLIMLLLRRRR---ARTTAK 377

  Fly   351 TKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTN 415
            .:::|::   ..|:..:|.:           :.:..|.:.::||  |:.|.:|:|          
  Fly   378 LRKQEQI---YIQTFATSAI-----------EMEDNVNYVDKYV--EKSQVLGLA---------- 416

  Fly   416 GGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGA 480
                                                         |.:|.|...::...:|||||
  Fly   417 ---------------------------------------------DIFEVPHSAIQIGRMLGEGA 436

  Fly   481 FGQVWRCEATNINGNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKD 545
            ||||....|.|:....|.|.||||.||.:....:..:.|:|:|::|.:..|.|||..|||||.|.
  Fly   437 FGQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCTIKP 501

  Fly   546 PTFVILEYVNRGKLQTYLRSSRAE-------------------RHYGNTHGKSN----------- 580
            |..:|:||||:|.|.:|||:.|.|                   |....:..||.           
  Fly   502 PYLMIMEYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRPIMTRTNSTSSPKSQSVNYIELKASS 566

  Fly   581 ----------------------------------------VLTSCDLTSFMYQVAKGMDYLTSRG 605
                                                    :|.:.:|.:|..|:|.||.:|..:.
  Fly   567 QTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQIANGMRFLEEQE 631

  Fly   606 IIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDI 670
            |.||||||||:||..:.|.|::|||.:|    ..||......|||:||::.|::.:|::|.||||
  Fly   632 ITHRDLAARNVLIDSNKTLKISDFGLSR----HGIYTNTRTRKLPLRWLSIEAIRENVYSSKSDI 692

  Fly   671 WSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFA 735
            |::|:::|||.|||::|||.||..:::..:..|.|||:||.|..::|.||..||..:|:|||.| 
  Fly   693 WAYGVVLWEIGTLGASPYPTISNDELIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPEERPTF- 756

  Fly   736 EIIQMLDKLLHTEMDYIELERFPDHNYYNIVSLSGE 771
               ..|.|:|..:..|:::....|...:..:|.:.|
  Fly   757 ---DALYKVLSPKTTYVDINSLSDDYVFPPISENRE 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 118/340 (35%)
PTKc 474..742 CDD:270623 118/337 (35%)
CG3277NP_608762.3 STYKc 426..763 CDD:214568 120/344 (35%)
PTKc 430..763 CDD:270623 120/340 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455312
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 1 0.900 - - E1_KOG0200
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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