DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and styk1b

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001292494.1 Gene:styk1b / 324714 ZFINID:ZDB-GENE-030131-3435 Length:447 Species:Danio rerio


Alignment Length:500 Identity:113/500 - (22%)
Similarity:196/500 - (39%) Gaps:114/500 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 ITIFSLKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTL 370
            |.::..:...:|::     ||:...:.|.::...|.|         .||.|..:.::        
Zfish    21 IRVYEQEVIIVPVI-----FFMMFLITLLFIMLLRFC---------PEKVERLQPAS-------- 63

  Fly   371 TDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQ---LSTGVTNGGVSSPGVPSPGTGEPG 432
               ||.|...:..||            .|..:|:...:   ::...|.....:|.  :|...:..
Zfish    64 ---SRVSRTRRNLQG------------IDAPLGLNALEGEPIALDTTTYMTFNPA--TPARLDHA 111

  Fly   433 SNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRL-KFFN---------ILGEGAFGQVWRC 487
            :|:   ..|.  |..||..:|||...     |.||.|| :.||         .|...:...::|.
Zfish   112 NNV---AFTD--GMFGATASAFAKPR-----ELPRQRLPENFNGVAPLPASYSLKSDSPISLYRA 166

  Fly   488 EATNINGNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILE 552
            ...|.|       |.::.||:||:..:.:..|.....:..|.||..:..|||..:.:.|...::|
Zfish   167 RMENRN-------VVLRVLKDSASNQESQSFLGFAAFLSQLGPHPFLPELLGVISLRAPLITVIE 224

  Fly   553 YVNRGKLQTYLRSSRAERHYGNTHGKSNV-------LTSCDLTSFMYQVAKGMDYLTSRGIIHRD 610
            .:....|..:|...|          :.||       :|...:.:....||..:|:|..:.:.|.:
Zfish   225 EMENRDLLGFLWRCR----------QDNVGPDGMCQMTEKKIFNMASHVASALDFLHGKDLHHCN 279

  Fly   611 LAARNILITDDHTCKVADFGFARDVITSKIYERK------SEGKLPIRWMATESLYDNIFSVKSD 669
            |.|||:|::...|.|:  :|.      ..:|.|.      ||.....:|.|.|.|.....:.|||
Zfish   280 LKARNVLVSRICTAKL--WGL------DDLYVRTSGSGNYSEDPGRKKWQAPELLAKRPSTPKSD 336

  Fly   670 IWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLF 734
            |||||:|::|:||||..|:..|...::::..:....:.||.:|...||:|:..|.....|:||..
Zfish   337 IWSFGLLLYEMVTLGEVPFAEIPVKELLQHHQRVKPIRKPNNCSNSLYSIIKSCCHWKEQDRPSL 401

  Fly   735 AEIIQMLDKLLHTEMD--------------YIELERFPDHNYYNI 765
            ||:.:.|.....:..|              |::...:.:.|.|.:
Zfish   402 AEVRRKLQSGEKSASDSSVLRVPEPINIQQYLKEAGYGESNSYTV 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 76/293 (26%)
PTKc 474..742 CDD:270623 74/289 (26%)
styk1bNP_001292494.1 PKc_like 164..409 CDD:304357 72/269 (27%)
Pkinase_Tyr 164..408 CDD:285015 72/268 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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